Drosophila simulans: Dsimw501_GD27483
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Entry
Dsimw501_GD27483 CDS
T01065
Symbol
Dsim_GD27483
Name
(GenBank) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dsi
Drosophila simulans
Pathway
dsi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Dsimw501_GD27483 (Dsim_GD27483)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsi03400
]
Dsimw501_GD27483 (Dsim_GD27483)
Enzymes [BR:
dsi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Dsimw501_GD27483 (Dsim_GD27483)
DNA repair and recombination proteins [BR:
dsi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
Dsimw501_GD27483 (Dsim_GD27483)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
DNA_ligase_A_C
DNA_ligase_IV
BRCT
mRNA_cap_enzyme
ANAPC2
Motif
Other DBs
NCBI-ProteinID:
KMZ09644
LinkDB
All DBs
Position
X
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AA seq
918 aa
AA seq
DB search
MSVDIASTIKFRDICGLFEKLKATQKVVNKEEALKSYYESFCRHRESFRRQTGLNDDQPE
DGASSFYSVLRLLLPGADTGRDTYGLQITALGRLYIRVLQLPTDSSDAIRLQHRTGTMYR
DYGDVVYSVLKPRCFNPPSNLRLNQIHQMLDTIANEDTEVKQQQLIRFTEQASPEEQKWL
IRLLLKSLGLGIGEQKIFGVLHPKAQDIYQRCSDLGHVCNLLADQTTDLDASTSKDSKAA
VKFVNLNSVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYI
SRNGVDYTRNFGHSYDHGTLTPKLRGLLPLGLESIILDGEMMVWDTNKLRFREKGENTDV
KSLKPEGSWQPCFVVYDLLYFNGQSLLDHTYIQRAYKLQKLIVEQSGVLQLMRARKIGSV
QEFNELYQQALDSHAEGIVLKKQGSRYQPGVRLGGGWYKDKADYIKGLITEFDVLIIGAF
YNRKRTFVDSFLLGVLQPAPPGSSNRPEVFSIGVVANNTKQRGVLNHTLKPHWHDVVNEP
PPLWFHYKPKEKAGCPDLWIEPQNSVILQVKAADLAPNGAFFTRKSLHFPRTEMKRDDKP
WSECMTLKEFNDLCQGPLAIKKLNKRQLRLEDVTTKRKQMRMTPSERSRLGLAVYEKRYD
ASTSASTSKLFDGLSFCILSGSAGRHSKHQLQELAVKNGGCIVENPLPNDPKCFCIAGDE
TFLVKRLILQQPRTCDIVRMEWLLRVCQKQELELRPRDLIAATEPLQQDLAECFDRHGDS
YTKDIANVEELQDLLQGIDLTADNVAGITASNLNALEDQLLDGKKNLNMFRHLNAFFYSP
HGDELAKLLFLQNGGRIVDDSDPQLNLGFICMSSDIDNDHLEHWRQNHSKLSADKVLNSA
WIHQCHREGILLPMHSFI
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagatatagccagcacgatcaagttccgggatatctgcggcctgttcgagaag
ctgaaggccacccaaaaggtggtcaacaaggaggaggccctcaagagctactacgagtcc
ttctgccggcaccgcgaatcctttcgccggcaaaccggattaaacgacgaccagccggag
gacggtgccagtagcttctattccgtgctgcgactgctgcttccgggtgcggacacgggt
cgggatacctatggattgcaaatcaccgcgctgggcaggctctacatcagggtgctccag
ctacccacggactccagcgatgcaatcaggctgcagcaccgcaccggaaccatgtaccgg
gactacggcgatgttgtttattccgtgcttaagccaaggtgctttaatccgcccagcaat
ttgagactgaatcaaatccatcagatgctggacaccattgccaacgaggacacagaagtt
aagcagcagcaactcatccggtttacggagcaggcctcgcccgaggaacagaagtggcta
atccggctgctgctgaagagcctcgggctggggatcggtgagcaaaagatcttcggtgtg
ctgcaccccaaggcgcaggacatctaccagcgctgctccgatctgggacatgtgtgcaat
ctgctggcagaccaaaccaccgacctagacgccagcaccagcaaggacagcaaggcggcg
gtcaagtttgtaaacctgaattccgtcatacggccattccaccagatacgacccatgctg
tgcgaacgatttccgggtgacatccaggagctgatgcagtcggatgtgctctatctggag
accaaaatggatggcgaacgctttcagctgcacatcgatcggggtcgtttcatgtacatt
tcccgcaatggagtggactacaccaggaactttggccacagctacgatcacggcaccttg
acgccaaagctgaggggacttttgccgctgggcctggagtccatcatactcgacggcgag
atgatggtgtgggataccaacaaactgcgctttcgggaaaaaggcgagaatacggacgtg
aagagcctaaagccggagggcagctggcagccctgtttcgtggtgtacgatctgctatat
tttaatggccagagtctgttggaccatacctacattcagcgggcgtacaaattgcagaaa
ctcatagttgaacagtcgggtgtgctgcagttgatgcgtgcacgcaaaatcggttccgtt
caagagttcaacgagctgtaccagcaggcactcgactcccacgccgaaggcattgtgctg
aagaagcagggatcaagatatcagcctggcgtaagactgggcggtgggtggtacaaggac
aaggctgattacatcaaaggactgattaccgagttcgatgtgctgatcatcggggcattc
tacaatcgcaagcgcacctttgtggactcatttttactgggagttcttcagccggcgccg
ccaggcagctctaatcgtcccgaagtcttcagtattggagtagttgccaacaatacgaaa
cagcgcggagtgctaaatcacacacttaaaccacattggcacgatgtagtcaatgagcca
ccgccactgtggtttcactacaagcccaaggaaaaggccggatgccccgatctgtggatc
gaaccgcagaactcggtaattttgcaggtgaaggctgctgacctggcgcccaatggagca
tttttcacccgaaaatcgttgcactttccgcgcactgagatgaaacgagatgataagccc
tggagcgagtgtatgacactgaaggagtttaacgatctctgccagggtcctttggccatc
aagaagttaaacaagcggcaactgcgactagaagatgtgaccaccaagcggaagcagatg
cgtatgacgccctcggagcgtagccgactgggattggccgtctatgagaagcgctatgac
gcgagcacctccgctagcacttccaaactcttcgacggtctgagcttttgcatactgagc
ggatctgccggacgacacagcaagcatcagctgcaggagctggctgttaaaaacggtggc
tgcatcgtggagaaccccctgcccaatgatccaaagtgcttttgcatcgcaggcgatgag
acgtttttagttaagcggctcatccttcagcagccacgcacctgtgacattgtgcgcatg
gagtggctgcttagggtctgtcagaagcaggagcttgaactgaggcctagagatcttatt
gcggccactgaaccactgcagcaggatctggctgaatgttttgaccggcacggtgatagc
tacaccaaagacattgccaacgtggaggagctgcaggatctgcttcaaggcattgattta
acagctgataatgtggctggcataaccgcatctaacctaaatgctctggaggatcagctt
ctggatgggaaaaagaatctgaacatgttccgccaccttaatgcgttcttctacagtccg
catggtgatgaactggctaagcttctgtttcttcaaaacggcggccggatagtcgacgat
tccgatccgcaactaaatctgggatttatctgtatgtcttccgacatcgataacgaccac
ttggagcactggcggcaaaatcattccaagttgagcgctgacaaggtcttaaactcggcg
tggatccatcagtgccatcgcgaaggcatcctacttcctatgcactcttttatctaa
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