Dickeya solani IPO 2222: A4U42_12185
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Entry
A4U42_12185 CDS
T04410
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00020
Citrate cycle (TCA cycle)
dso00270
Cysteine and methionine metabolism
dso00620
Pyruvate metabolism
dso00630
Glyoxylate and dicarboxylate metabolism
dso00680
Methane metabolism
dso00710
Carbon fixation by Calvin cycle
dso00720
Other carbon fixation pathways
dso01100
Metabolic pathways
dso01110
Biosynthesis of secondary metabolites
dso01120
Microbial metabolism in diverse environments
dso01200
Carbon metabolism
Module
dso_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dso_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dso_M00012
Glyoxylate cycle
dso_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A4U42_12185
00620 Pyruvate metabolism
A4U42_12185
00630 Glyoxylate and dicarboxylate metabolism
A4U42_12185
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
A4U42_12185
00720 Other carbon fixation pathways
A4U42_12185
00680 Methane metabolism
A4U42_12185
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
A4U42_12185
Enzymes [BR:
dso01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
A4U42_12185
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
ANE76027
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Position
2827833..2828774
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AA seq
313 aa
AA seq
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MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTDVKIKGFSG
EDATPALEGADIVLMSAGVARKPGMDRSDLFNVNAGIVRNLVSQIARTCPKACIGVITNP
VNTTVAIAAEVLKQAGVYDKDKLFGVTTLDIIRSNTFVAELKGKQPQAINVPVIGGHSGV
TILPLLSQIPGVSFTEQETADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
AMQGESGVVECAYVEGDGKHARFFAQPLLLGKNGVAERKDIGTLSAFEQQALVSMLDTLK
QDIALGEEFVNKK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcagttctcggagccgcaggtggtattggtcaagcccttgcccttctcctc
aaaacccagcttccttcaggttcagagctctctctttatgatatcgcccccgttacgccg
ggtgtggctgtcgatctgagccatattcccaccgatgtgaaaattaaaggtttcagcggt
gaagatgctactcctgctctggaaggcgcggatattgtgctgatgtctgccggggtggcc
cgcaagccggggatggatcgttccgatctgtttaacgtgaacgcagggattgtgcgtaac
ctggtttcacagattgcccgtacttgccctaaagcttgcatcggcgttatcaccaacccg
gtcaataccacggtggcgattgccgctgaagtgctgaagcaggccggtgtgtatgacaaa
gacaagctgtttggcgtcaccacgctggacattatccgttccaatacgtttgttgccgaa
ctgaaaggcaaacagccgcaagctattaacgtgccggttatcggcggccattccggcgtc
accatcctgccgttgctgtcccagattccgggcgtgagcttcaccgaacaggaaacggcc
gatctgaccaaacgtattcagaatgcaggcactgaggttgtggaagcgaaagccggcggc
ggatcagcaaccctgtccatggggcaggcagccgcacgctttggtctgtctctggttcgt
gctatgcagggtgaaagcggcgtggtcgaatgcgcttacgtggaaggtgatggcaaacac
gcccgtttctttgctcaaccgctgttactgggcaaaaatggtgttgccgagcgtaaagac
atcggtacgttgagtgcgtttgaacagcaggctctggttagcatgctggataccctgaaa
caggatatcgcgctgggcgaagagttcgttaacaagaaataa
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