Dipodomys spectabilis (banner-tailed kangaroo rat): 122097417
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Entry
122097417 CDS
T07891
Symbol
Arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04270
Vascular smooth muscle contraction
dsp04611
Platelet activation
dsp04810
Regulation of actin cytoskeleton
dsp04928
Parathyroid hormone synthesis, secretion and action
dsp05135
Yersinia infection
dsp05163
Human cytomegalovirus infection
dsp05200
Pathways in cancer
dsp05205
Proteoglycans in cancer
dsp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122097417 (Arhgef1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
122097417 (Arhgef1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
122097417 (Arhgef1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
122097417 (Arhgef1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122097417 (Arhgef1)
05205 Proteoglycans in cancer
122097417 (Arhgef1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
122097417 (Arhgef1)
09171 Infectious disease: bacterial
05135 Yersinia infection
122097417 (Arhgef1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122097417 (Arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122097417 (Arhgef1)
Membrane trafficking [BR:
dsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122097417 (Arhgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
SOS1_NGEF_PH
SET_assoc
Motif
Other DBs
NCBI-GeneID:
122097417
NCBI-ProteinID:
XP_042523826
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MEDVARGAAPGPPRPGLVPISIIGAEDEDFENELEANSEEQNSQFQSLEQVKRRPAHLMA
LLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFSHSFLEKTSVLRVPVPPNVTFE
LDRTRLDLISEDIQRRFVQEVVQSQQAAVSRQLEDFRSKRLMGMTPWEQELAQLEPWVGR
DRASYEARERHVAERLLAHLEEMQHTISTDEEKSAAVVAAISLYMRYLGVRTKSGDKKSG
RNFFRKKVMGNRRSDEPPKTKKGLSSILDAARWNRGEPPAPDFRHLKGEVDGEKPGPVDR
KGSLGVPSRDRTIGAPSQDPSGVSLSPLPVDSPYREAGSDTSLEPGDTPSQGPTSLEPLA
PPENPEDGAETERRWKRLPGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPS
SATAVLGPTRQATPEPGDDGEPGRSGLELEPEEPPGWRELVPQDTLMNLPKSQVKRQEVI
SELLVTEAAHVRMLRVLHDLFYQPMADGGFFPLEELQNIFPSLDELIEVHSLFLDRLMKR
RQESGYLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFSAFVQ
EAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPAEREKVELAAKCCREILHH
VNQAVRDMEDLLRLKDFQRRLDLSHIRQSSDPMLSEFKNLDITKKKLIHEGPLTWRVTKE
KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD
HKAFYVIFTWDQEAQIYELVAQSVSERTNWCALITETAGSLKVPAPANRLKPPRPSPSST
RETLLSSSENGNGGGRDMPPAEAQTERALRDLLPFCRPGAEGQLAVTALQKVLALKQLLL
PTEEDRGAGPPGEGDGVPGGGPLGPAQTQEVQEHLLSLEEALKQLEELEEELCRLRPLLS
QLGGNPVPQSSCT
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtggcccgaggggcggccccagggcctccaagacctggcctagtgcccatc
agcattatcggagcggaggatgaggattttgagaacgagctggaggcgaactcagaggag
caaaacagccagttccagagcctggagcaggtgaagcggcgtccagcccacctcatggcc
ctcctgcagcatgtggctctgcagtttgagccaggacccttgctctgctgcctgcatgcc
gacatgctgggttctctgggccccaaagaggccaagaaggccttcctcgacttttcccat
agcttcctggagaagacctcggtcctgcgggtcccagttcctcccaacgtcacctttgag
cttgaccgcactcgactcgacctcatctccgaggacatccagcgacgctttgtgcaggag
gtggtccagagtcagcaggcggctgtgagccggcagctggaagacttccgctccaagcgg
ctcatgggcatgacgccctgggagcaggagctggcccaactggagccctgggtgggccgg
gaccgagccagctatgaggcccgcgagcggcatgtggctgagaggctgctggcccacctg
gaggagatgcaacacaccatctccacagacgaggaaaagagtgccgctgtggtcgccgcc
atcagcctgtacatgcgctatctcggagtgcggaccaagagtggggataagaaatcgggg
cgtaatttcttccggaaaaaggtgatggggaaccggcggtcagatgagccccccaagacc
aagaaagggctgagcagtatcctggatgctgctcgatggaaccggggcgagcctccagct
ccagactttcgacacctcaaaggcgaggttgatggggaaaagccaggccctgtagaccgc
aagggaagccttggcgtgccttctcgggacaggactattggggctcctagtcaggacccc
tctggagtctccctgagccctctgcctgtggacagcccatatcgggaagcaggttctgat
acctccctggagccgggagacactccttcacaaggccctacaagtctggagcccctagca
cccccagaaaacccagaggacggtgctgagacagagagaaggtggaagaggctgccaggg
cgtctggggcgctcagagagcctgcgggtgagtgaccgccgccggccttcccggggcagc
ctcggggctaagggccggggtgggggccgctcccggagcgacgtggacatggaccccagc
tctgccacagccgtgcttggccccacccgacaagccacccctgagcctggagatgatggg
gagccaggacggtcaggactggagctggagccagaagaaccccctgggtggcgggagctg
gtcccccaggacaccctgatgaaccttcccaagagccaggtgaagcggcaggaagtgatc
agtgagctgctggtgacggaggctgcccatgtgcgcatgctgcgtgtgctacacgatctc
ttctaccagcccatggcggatgggggcttcttccccctggaggagctacagaacatcttc
cccagcctggatgagctcatcgaggtgcactctttgttcctggatcgcctgatgaaacgg
agacaggagagtggctacctcatcgaggagatcggagacgtgctgctggcccggtttgat
ggtgccgagggctcatggttccagaagatctcctcccgcttctgcagccgacagtcattt
gccttggagcagctcaaagccaaacagcgcaaggagcctcgattctccgcctttgtgcag
gaggcagaaagccgcccacgctgccgccgcctgcagctgaaggacatgatccccacagag
atgcagcggctgaccaagtaccccctgctgctgcagagcatcgggcagaacacagaggag
ccggcggagcgggagaaagtggagctggccgccaagtgctgccgagaaatcctccaccat
gtcaaccaggctgttcgtgacatggaggacctgctgaggctcaaggatttccagcggcgc
ctagatttgtcccacattcggcagagcagcgaccccatgctgagcgagttcaagaacctg
gacatcaccaagaaaaagctgatccatgagggcccgctaacatggcgggtgaccaaggag
aaggctgtggaggtccacgtgctcctgctggatgacctgctgctgctgctccagcgccag
gacgagcggctgctactcaagtcccacagccggacactgacgcccacccccgacggcaag
accatgctgcggcccgtgctgcggctcacctccgccatgacccgggaggtggccactgat
cacaaagccttctatgtcattttcacctgggaccaggaagcccagatatacgagctggtg
gcacagtctgtgtcagagcggacaaattggtgtgccctcatcacagagactgctggatcc
ctgaaagtcccagcccctgctaaccgactcaagcctccccggcccagcccaagcagcacc
cgagaaaccctgctcagcagctccgagaatggcaacggtggtggccgagacatgcctcca
gcagaggcccagactgagagagctctcagagacctcctgcccttctgcagacccggtgcc
gaaggccagctcgccgtcacagccctccagaaagtgctggccctgaagcagctcctgttg
cctacggaggaagaccgtggggcggggcctcccggagaaggggacggggtgccaggcggt
ggtcccctgggacctgcacagacccaggaagttcaggagcacctgctcagcttagaggaa
gccctaaagcagctggaggagttagaagaggaactctgccgcctgcggcccctcctgtct
caactcggggggaaccctgtcccccagtctagctgcacttga
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