Dipodomys spectabilis (banner-tailed kangaroo rat): 122098337
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Entry
122098337 CDS
T07891
Symbol
Rfng
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00514
Other types of O-glycan biosynthesis
dsp04330
Notch signaling pathway
dsp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122098337 (Rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122098337 (Rfng)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
122098337 (Rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dsp01003
]
122098337 (Rfng)
Enzymes [BR:
dsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
122098337 (Rfng)
Glycosyltransferases [BR:
dsp01003
]
Glycan extension
O-Glycan
122098337 (Rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
122098337
NCBI-ProteinID:
XP_042524647
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MARAGAALCRAGLALAATLAALLLLPRPPPPPRAPAPRPAARGAPAPAGRGLRPDDVFIA
VKTTRRNHARRLRLLLRTWISRARRQTFIFTDGEDPEAPAAGGRVINTNCSAVRSRQALC
CKMSVEYDKFIESGRKWFCHVDDDNYVTRRPAAAAVHLLPSQDVYLGRASLDHPIEATER
VPGGGTVATVKFWFATAGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCTVGYIVE
GLLGARLLHSPLXHSHLENLQRLPPEAVLQQVTLSYGGPENPQNVVGVAGSFSLQQDPTR
FQSVHCLLY
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgccggggcggcgctgtgccgggccggcctcgcgctggccgccacgctggcc
gcgctgctgctgctcccgcgcccgccgccgccgccccgcgcccccgcgccccgcccggcc
gcccgcggcgccccggcccccgccggccgcggcctgcggcccgacgacgtcttcatcgcg
gtcaaaaccacgcggcggaaccacgcgcggcgcctgcggctgctgctgcgcacgtggatc
tcccgggcccgccggcagacgttcatcttcaccgacggagaggaccccgaggctccagct
gcaggcggccgcgtcatcaacaccaactgctcggccgtgcgcagccgccaggccctgtgc
tgcaagatgtcggtggagtacgacaagttcatcgagtccggccgcaagtggttttgtcac
gtggacgatgacaactatgtgacccgaaggcctgctgcagctgctgtccaccttctcccc
agccaggacgtctacctgggccgggccagcctggaccaccccattgaagccaccgagagg
gttccgggaggcgggaccgtggccacggtcaagttctggttcgccaccgccggggcgggg
ttctgcctgagcaggggcctcgcgctcaagatgagcccctgggccagcctgggcagcttc
atgagcaccgccgagcgcgtgcggctcccagacgactgcacggtgggctacatcgtggag
gggctgctgggcgcccgcctgctgcacagtcccctcntccactcccacctggagaacctg
cagcggctgccgcccgaagccgtgctccagcaggtcaccctgagctatgggggccctgag
aacccgcagaacgtggtgggtgtggcggggagcttcagcctgcagcaggaccccacacgg
ttccagtctgtgcactgccttctctac
DBGET
integrated database retrieval system
