Dipodomys spectabilis (banner-tailed kangaroo rat): 122103405
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Entry
122103405 CDS
T07891
Symbol
Scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dsp04040
]
122103405 (Scn4a)
Ion channels [BR:
dsp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122103405 (Scn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
122103405
NCBI-ProteinID:
XP_042529920
LinkDB
All DBs
Position
Unknown
AA seq
1826 aa
AA seq
DB search
MASTSLPNLVPIGPDCLRPFTRESLAAIEQRAVEEEARLQRNKQMEIVEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYILSPFSII
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTTWYGNDT
WYGNDTWYNSHESWASNSTFDWDAYISDEDNFYFLEGSNDALLCGNSSDAGHCPEGYECM
KAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSF
YLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKHQEELEKAKAAQALESGEG
NGDQAHSKDCNGSLDTSAGEKGPPRPSCSADSAISDAMEELEEAHQKCPPWWYKCSHKVL
IWNCCAPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHFDNVLSVGNLV
FTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRV
FKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIASD
CNLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNL
FLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLHGKVLSPKDIML
SLGEPGGTGEAGEAGDSAPEDEKKELPPDEGDKDLKKNNHILNHVGLANGTPTSIELDHL
NFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDIKKPPPPLYDGNSSVCSTADYKP
PEEDPEEQAEENPEGEQPEECFTEACVQRCPCLYVDISQGRGKMWWTLRRACFKIVEHNW
FETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFIVEMLLKWVAYGFKVY
FTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNA
LLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISEVNNKSQCESL
MHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNLYMY
LYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQ
KPIPRPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYNINMVF
IIIFTGECVLKMFALRHYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRL
ARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESG
IDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTHIKGDCGNPS
IGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDAT
QFIDYNRLSDFVDTLQEPLKIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSG
EMDALKQTMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLLQRSVKQASY
LYRHSQDGSADEAPEKEGLIASAMNKMYGRENGGHCSVHSQGEEEGSTGAEGPPAGLTPV
SPSDPAPPPAPPPGQTVRPGVKESLV
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggctagcacatccctgcccaacctggtgcccattggcccagattgcttgcgccccttc
acccgggagtccctggcagccatagaacagcgggcagtggaggaggaggcccggctgcag
cggaacaagcagatggaaatagtggagccagagcggaagccacgcagtgacctagaagct
ggcaagaatctgcctctcatctatggggaccccccaccggaagtcattggcatccccctg
gaggacttggacccctactacagtgacaaaaagaccttcatcgtgctcaacaagggcaag
tccatctttcgcttctctgccacgcctgctctctacatcctgagccccttcagcatcatc
aggcgtggtgccatcaaggtgcttatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtgttcatgaccatgagtgacccgccgccctggtccaaggatgtg
gagtacaccttcacagggatctacacgtttgagtccctcatcaagatgctagcccggggc
ttctgcatcgatgacttcacattcctgagggacccctggaactggctggacttcagtgtc
atcatgatggcgtatctgacagagttcgtggacctgggaaacatctcagccctgagaacc
ttccgggtactgcgggccctgaaaaccatcactgtcatcccagggctgaagaccattgtg
ggggccctgatccagtcagtgaaaaagctgtccgacgtgatgatcctcaccgtcttttgc
ctaagtgtctttgccctcgtgggactgcagctgttcatggggaacctccgtcagaagtgt
gtgcgctggcccccacccttcaacgacaccaacaccaccacatggtacggcaatgacacg
tggtacggcaatgacacgtggtacaacagccacgagagctgggccagcaactccactttt
gactgggatgcctacatcagtgacgaagataacttctatttcctggagggttccaatgat
gccctgctctgtgggaacagcagtgatgctgggcactgccctgaggggtatgaatgcatg
aaggctggccggaaccccaactatggctacaccagctacgacaccttcagctgggccttc
ctggctctcttccgcctcatgacccaggactactgggagaacctcttccagctgaccctt
cgagcagctggcaagacctacatgatcttctttgtggttatcatctttctcggctccttc
tacctcatcaatctgatcctggcagtggtggccatggcctatgcagagcagaatgaggcc
accctggcggaggaccaggagaaagaggaagagtttcagcagatgcttgagaaattcaaa
aagcaccaggaagagctggagaaggccaaggctgcccaggctctggaaagtggagaggga
aatggggaccaggcccacagcaaagactgcaatggcagcctggacacatcagcaggggag
aaggggcccccgaggcctagctgcagtgcagacagtgccatctctgatgctatggaagag
ctggaagaggcccaccagaagtgcccaccttggtggtacaagtgctcacacaaagtgctc
atatggaactgctgtgccccgtgggtaaagttcaagcacataatccacctgattgtcatg
gaccccttcgtggacctgggcatcaccatctgcatcgtgctcaacaccctcttcatggcc
atggagcattatcccatgacagagcactttgacaacgtgctctctgttggcaacctggtc
ttcactggcatcttcactgcagagatggtgctgaagctgatcgccatggatccctatgag
tatttccagcagggctggaacatctttgacagcatcattgtcaccctcagcctggtggag
ctgggcctggccaatgtgcaggggctgtcggtgcttcgctccttccgtctgctgcgggtc
ttcaagctggccaagtcatggccaacgctcaacatgctcatcaagatcatcggcaactcg
gtgggggcgctgggcaacctgacattggtgctggccatcatcgtgttcatctttgctgtg
gtgggcatgcagctgtttggcaagagctacaaggagtgtgtgtgcaagatcgcctcagac
tgcaacctgccccgctggcatatgcatgactttttccactccttcctcattgtcttccgc
atcctgtgtggggaatggatcgagaccatgtgggactgcatggaggtggccggccaggcc
atgtgtctcacagtcttcctcatggtcatggtcatcggcaacctggtggtcctgaacctc
ttcctggctctcctgctgagctccttcagcgctgatagcctagcagcctcggatgaagat
ggcgagatgaacaacctacagatcgccatcgggcgcatcaagtggggtattggcttcgcc
aaggccttcctcctggggctgctacatggcaaggtcctgagccccaaggacataatgctg
agccttggggagcctgggggcactggagaggctggagaagctggggacagtgcccctgag
gatgagaagaaggagctgccacctgatgagggggacaaggacctgaagaagaacaatcac
atcctcaaccacgtgggcctggctaacggcacacctaccagcatcgagctggaccacctc
aacttcatcaataacccttatctgactatccaggtgcccattgcctccgaggagtcagat
ctggagatgcccactgaggaggagactgacacattctcagagcctgaggacatcaagaag
ccgcctccacccctctatgatgggaactcctccgtctgcagcacagctgactacaagccc
cccgaggaagaccctgaggagcaggccgaggagaaccccgagggagagcagcctgaggag
tgcttcaccgaagcttgtgtgcagcgatgtccctgcctctatgtggacatctcccagggc
cgtgggaagatgtggtggacccttcgcagggcctgcttcaagattgttgagcacaactgg
tttgagaccttcattgtcttcatgattctgctcagcagtggggctctagccttcgaggac
atctatatcgagcagcggcgtgtcatccgcaccatcctggaatatgcggacaaggtcttc
acctacatcttcattgtggagatgctgctcaagtgggtggcgtacggcttcaaggtgtac
ttcaccaacgcctggtgctggcttgacttcctcatcgtggatgtctccatcatcagcctg
gtagccaactggctgggctattcggagctgggacccatcaaatctctgcgcacactgagg
gccctgcgtcccctgagagcgctgtctcgatttgaaggcatgagggtggtcgtgaacgcc
ctcttgggagccatcccctccatcatgaacgtgctgctggtgtgcctcatcttctggctt
atcttcagcatcatgggcgtcaacctgtttgctggaaagttctactactgcatcaacacc
accacctcagagaggtttgacatctcggaggtcaacaacaagtcgcagtgtgaaagcctc
atgcacacaggccaggtccgctggctcaacgtcaaggtcaactacgacaacgtgggtctg
ggctacctctcgctcctgcaggtggccaccttcaagggctggatggacatcatgtatgca
gctgtggactctcgagagaaggaagagcagccgcagtatgaggtgaacctctacatgtac
ctctacttcgtcatcttcatcatcttcgggtccttcttcacgctcaacctcttcatcggt
gtcatcatcgacaactttaaccagcagaagaagaagtttggaggaaaagacatcttcatg
acagaagaacagaagaaatactataatgccatgaagaagcttggctccaagaagccccag
aagccaatcccccggccccagaacaaaatccagggcatggtgtacgactttgtgacgaag
caggtattcgacatcaccatcatgatcctcatctgcctcaacatggtcaccatgatggtc
gagacagacgaccagagccagctcaaggtggacatcctgtacaatatcaacatggtcttc
atcatcatcttcaccggggagtgcgtgctcaagatgttcgcgctgcgccactactacttc
actgtcggctggaacatcttcgactttgtggtggtcatcctgtccatcgtgggcctcgcg
ctctccgatctgatacagaaatacttcgtgtctcccacgctgttccgtgtgatccgtctg
gctcgtattggacgagtcctgcgactgatccgtggggctaagggcatccggacgctgctc
ttcgccctcatgatgtctctgcctgccctcttcaacattggcctcctcctcttccttgtc
atgttcatctactctatctttggcatgtccaacttcgcctatgtcaagaaagagtcgggc
atcgacgacatgttcaacttcgagaccttcggcaacagcatcatctgtctttttgagatc
accacgtcggctggctgggatgggcttctgaaccccatcctcaacagtgggcccccagac
tgtgaccccaccctggagaacccaggcacccatatcaagggtgactgtggcaatccatcc
atcggcatctgcttcttctgcagctacatcatcatctccttcctcatcgtggtcaacatg
tacattgccatcatcctggagaacttcaatgtggccacggaggagagcagcgagcccctg
tgtgaggatgactttgagatgttttatgagacgtgggagaagtttgacccggatgccaca
cagttcattgattacaaccgactctccgacttcgtggacaccctgcaggagccgctgaag
attgccaagcccaacaagatcaagctcatcacactggacctgcccatggtgccaggggac
aagatccactgcctggacatcctctttgccctcaccaaagaggtgctgggcgactctggg
gaaatggatgccctcaagcagacaatggaggagaaattcatggcagccaatccttccaag
gtctcctacgagcccatcaccaccaccctcaagaggaagcaggaggaggtgtgtgccatc
aagatccagagggcttaccgccggcatctgctgcagcgctctgtgaagcaggcatcctac
ctgtaccgccacagccaggatggcagcgcggatgaggccccagagaaggaaggactcatc
gccagtgccatgaacaagatgtatggccgtgagaacggaggccactgcagcgtccacagt
cagggggaggaggaaggctctacaggggctgagggaccccccgcggggctcacacctgtc
agcccctcagatcctgccccaccccctgcccctccaccaggacagacagtgcgcccaggg
gtcaaagagtctcttgtctag
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integrated database retrieval system
