Dipodomys spectabilis (banner-tailed kangaroo rat): 122108604
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Entry
122108604 CDS
T07891
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122108604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122108604
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dsp04054
]
122108604
Membrane trafficking [BR:
dsp04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
122108604
Pattern recognition receptors [BR:
dsp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122108604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FIIND
NACHT
UPA-FIIND
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
AAA
AAA_24
RsgA_GTPase
nSTAND3
AAA_14
YopE_N
ATPase_2
Motif
Other DBs
NCBI-GeneID:
122108604
NCBI-ProteinID:
XP_042536526
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MNRNRYGLSGLKDDKHLIPEDTKIRSKNQKTKKPFPWKNEYFTQLLLLQKHYPKGQKPLF
RKSWHQDEVERGQLIDIRDLFGPSLDTQGQSPTVILYGSAGIGKSTLARQVRGAWEEDWL
YRDLFQHIFFISCRELDXHGISSLAELLEKDPAVPEVPIHXILSRPEQLLFILDGVDELH
GTVERKISYFGLHWSKRQPIYILLSNLLSRIMLPEASLLITAGTTALSKLVPFLKQPCQV
EVLGFSEFSRKEYFYKYFPDESQALKAFSLIESNPELLTLCLVPWVSWLVCTCLKLRMER
GEEIVLTFQTTTALCLHYLVQNLPAQLMGTHLRGICTLAAEGIRLRKTVFTMDELRKYGL
RQDVILNLLGIGILQDHQSMSYSFTHLCFQEFLAAVSFALWDEYPIFQIAENDLQVEYRR
HHLFGESTIHFLFGLLSEQVTKEIKCITHQLPQMKKQELLYWAQMQSRYQQPFSLNVLQC
LYETQDEEFLTQVMQRFRRTRMYLRTDMELLVATFCIKFCSHVKRLQLIGPQRQVWRFPG
VVLSMWAPLTDTSWKVLFSTLKVSGSLKELDLSGNPLSCSAVQSLCETLRHPQCHLETLR
LARCGLTSSCCQDLASVLSNSCTLRELDLRQNDLGNLGVKLLCEGYGHPACQLTFLRVDQ
TSLSDTVKEEMKALEEERLELLMSTLWKTSELTSTERSDGGEIDNSPTSLKEQRLNSEED
AGLASELGLFHLTAASPTIKPGACLATKDVFFCHRGPVNTELIDRERNLCCVHFPVAGFY
HCPNMDLSFEVSRAVTITIELCSWDTCLDKTWLQHTWMIAGPLFGIRAEQGTVAAVHLPH
FVDLQGEHVDISQFNVAHFKEEGMLLEKPARVEPQCAVLENPSFSPIGVLLRMIPGVRHF
IPIICTTLLYYYLSPDEVTLHLYLIPCDCSIQKAIDEEEEKFQFVRIYKPPPLDALYLGS
RYVVSGSGKMDIIPQELELCYRSPGVSQLFSEISVSELDSAIRLKMEEKKNRTLIWETLL
KPGDFRSPATPVLPTPKGGLAFPHFVDRHRKQLVARVTSVDSVLDLLHGEMLSEEQYEQV
RAEATSPAQMRKLFSFSHAWDQNGKDQLYKALKKTHPHLIMELLEW
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaatagatacgggttatcaggattgaaagacgataagcacttgatcccagaa
gacacaaaaataagatccaagaaccagaagacaaagaagcctttcccttggaaaaatgag
tatttcactcaacttctacttctacaaaaacattaccccaaaggccaaaaacccctcttc
aggaaaagttggcatcaggatgaagtggagagaggacagttgattgacatcagagattta
tttggcccaagtctagacactcagggacaatctccaacagtcatactgtatgggtctgcc
ggaattgggaaatcgactctggccaggcaggtgagaggagcctgggaggaagattggctg
tacagggacctattccagcacatctttttcatcagttgcagggagctagactagcatggc
atttcgagtctggctgagcttcttgaaaaggacccagctgtcccagaagttcccattcat
tagatcctgtctaggccagagcagctgctcttcatcttagatggtgtggatgagctacat
gggactgtagagaggaagatatcttactttggtctgcactggagcaagcgtcagccaatt
tacatactactgagcaatttgctgagtagaatcatgcttcctgaggcttccttgctcatc
acagcggggaccacagctctctctaagctggtccctttcttgaagcagccatgtcaggtg
gaagtcctgggcttctctgagttcagcaggaaggaatatttctacaaatatttcccagac
gagagccaagcacttaaagcctttagcttgattgaatcaaaccccgaactcttgactctg
tgtctagtgccctgggtgtcgtggctggtctgcacatgcctcaagctacggatggagcgg
ggggaggaaattgtactcaccttccagaccaccacagccctctgtctgcactaccttgtc
cagaatctcccagctcagctcatggggacacatctcagggggatatgcaccctggctgct
gaaggcatccgtttgagaaagactgtattcactatggatgagttgaggaagtatggttta
agacaggatgtcattctcaatttattagggattggtatccttcaagaccaccaatctatg
agctacagcttcactcacctatgtttccaggagttccttgcagcagtgtcttttgcctta
tgggatgaatatcctatcttccagatagcagagaacgacttgcaagtagagtatagaagg
catcacctgtttggagaatcaaccattcacttcctctttggtcttttaagtgaacaagta
acaaaagagataaaatgtattacccaccaactgcctcagatgaagaaacaggagctgcta
tattgggcacagatgcaatccaggtaccagcagccattttcactgaatgtgcttcaatgt
ctttatgagactcaggatgaagagtttctgacccaagttatgcaaaggttcaggagaacc
agaatgtacctccgtacagacatggagcttctggtggccactttctgtattaaattctgc
agccatgtgaagaggcttcagctgattggaccacagagacaagtatggagattccctgga
gtagttctgtccatgtgggccccactcactgatacctcgtggaaggttctcttctccact
ctcaaggtcagtggaagcctgaaggaattggacttaagtggcaatccactgagttgttct
gcagtgcagagtctgtgtgagaccctaagacacccccagtgccatctggagaccttgagg
ctggccagatgtggcctcacctccagctgctgccaggacctggcctctgtgcttagcaac
agctgcacgctgagggaactcgacctgcgtcagaatgacctgggtaaccttggtgtgaag
ctgctctgtgagggttatgggcatcctgcctgccaactcacattcctacgggtagaccag
acctctctgagtgacacagtgaaggaggaaatgaaggctctagaggaagagagacttgag
ctgctcatgtcaacactgtggaagacgagtgagctgacctctactgagagatcagatgga
ggagagatagataacagccccacctcactcaaggagcaaagactaaactcagaggaagat
gccggactagcatcagagctgggactctttcatctgactgctgcctcaccaaccatcaag
cccggggcttgtctagcaacaaaagatgtcttcttctgtcacagagggcctgtgaatact
gagctaattgacagagaaaggaacctgtgctgtgttcacttccctgtggctggcttctac
cactgtcccaacatggatctgagctttgaagttagcagggcagtgaccatcaccattgaa
ttgtgttcctgggacacttgcctggacaagacttggctgcagcacacctggatgatagca
gggcctctgtttggcatcagggctgagcaaggaactgtggctgctgtgcacctccctcac
tttgtcgacctccaaggtgagcatgtggacatctctcagttcaacgtggcccactttaaa
gaggaggggatgctgctggagaagccagccagggtggagccacaatgtgcagtcctggag
aatcccagcttctcaccaataggagttctactgaggatgattcctggcgtccggcacttc
atccccatcatctgcaccacattgctgtactactacctgagtcctgatgaagtcaccttg
cacctctacctgatcccctgtgactgcagcattcagaaggccatagatgaagaagaagaa
aagtttcaatttgtaagaatatacaagccacccccactggatgccctgtacctgggttct
cgctatgttgtatctggatctgggaagatggatatcatcccccaggaactggagctgtgc
tatcggagccctggagtatcccagctcttctctgagatctctgttagtgagctggactca
gcaatcaggctgaaaatggaagagaagaaaaataggactctaatatgggagaccttgctg
aaaccaggagatttcagatcaccagctactccagtacttccaacccccaaaggtggcctg
gccttcccacactttgtggacagacatcggaagcagctggtggctcgagtgacatctgtg
gactcagtcttggacctgctgcatggagagatgctgagtgaggagcagtatgagcaggta
cgggctgaggccaccagcccagcccagatgcggaagctgttcagtttcagccatgcctgg
gaccagaatggcaaagaccaactctacaaagccctgaagaagacacatcctcacttgatc
atggaactcttggagtggtga
DBGET
integrated database retrieval system
