Dipodomys spectabilis (banner-tailed kangaroo rat): 122111481
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Entry
122111481 CDS
T07891
Symbol
Tap1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp02010
ABC transporters
dsp04145
Phagosome
dsp04612
Antigen processing and presentation
dsp05163
Human cytomegalovirus infection
dsp05168
Herpes simplex virus 1 infection
dsp05169
Epstein-Barr virus infection
dsp05170
Human immunodeficiency virus 1 infection
dsp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122111481 (Tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122111481 (Tap1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
122111481 (Tap1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
122111481 (Tap1)
05168 Herpes simplex virus 1 infection
122111481 (Tap1)
05163 Human cytomegalovirus infection
122111481 (Tap1)
05169 Epstein-Barr virus infection
122111481 (Tap1)
09163 Immune disease
05340 Primary immunodeficiency
122111481 (Tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122111481 (Tap1)
Enzymes [BR:
dsp01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
122111481 (Tap1)
Transporters [BR:
dsp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
122111481 (Tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
ABC_ATPase
AAA_21
AAA_22
AAA_23
AAA_15
AAA_25
Zeta_toxin
AAA_30
SRP54
AAA_18
APS_kinase
AAA_33
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
122111481
NCBI-ProteinID:
XP_042540262
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MAGAGVSRPFPAWVGAALLLLADWALLRPALPGMFSRLMPAAGPLLQIWAVGLSRWATLW
LGVHGVLRATAPREGADSAARGWLVAAQPVAAALGLALPGLASFRELRSWGALGGARALH
WGSRSDAFLLGYAAALPAVALWHKLGSLWAPPGVAARRLLGCLGSEIRRVALVLALLVLS
CLGEMAIPFFTGRLTDWIQQDKTTSAFTRNITLMSVLTIASAVLEFVGDGIYNRTTGHVH
SHLQGEVFRAVLRQETEFFAQNQTGAITSRVTDNTSNVCESLSEKLSLLMWYLVRGLCLL
GFMLWGSLSLTMVTLAFLPVLILLPAKMGELYKSVEVQKRKALAEASQVAIEALSAMPTV
RSFANEEGEAQKFRNKLEELKTLSQKEALGLVANVWTTSISGMLLKVGILYLGGKLVTRG
ALSSGNLVTFVLYQIQFTTAVEVLLNYYPEVQKAVGSSEEVFEYLDRTPRCLPSGLLSPL
NIQGLVQFQDVSFAYSSCPDAPVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQP
TQGQVLLDGEPISQYEHRYLHRQVAAVGQEPQLFGRSVRENIAYGLIEKPPLEEIMAAAL
ESGAHHFICRLPQGYDTEAGEDGSQLSGGQRQAVAMARALIRKPCVLILDDATSALDADS
RLRVQQLLYTSPTRHSRSVLLITQHLSLVEQADHILFLKGGAICEQGTHQQLMEKRGLYW
AMVEASAAAPE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccggcgtctcccgacccttccccgcatgggtcggggccgcgctgctgctg
ctcgcagactgggcgctgctccggcccgcgctgcccgggatgttctcccggctgatgccc
gcggcggggccgctgctccagatctgggcggtgggtctgagccgctgggccacgctgtgg
ctgggggtccacggggtgctcagggcgacggctccccgcgagggcgcagactcggcggcc
cgcgggtggctggtcgccgcgcagcccgtggcggcggcgctgggcctggcgctgccgggg
cttgcttcgttccgagagctgcgctcgtggggagccctcggcggcgcccgggctctgcac
tggggcagtcgctcagacgccttccttctgggctacgcggccgccctgcccgcggtcgcc
ctgtggcacaagctggggagtctgtgggcgcccccgggagttgccgcgcgccggcttctc
ggctgcctgggctcagagatccgccgcgtcgcgttggtcctggccctgctggtcctctcc
tgtcttggggagatggccattccattcttcactggccgccttactgactggattcaacag
gataagaccacctctgccttcacccgaaacataactcttatgtccgtgctcaccatagcc
agtgcggtgctggagttcgtgggtgatgggatctataacagaaccacgggccatgtgcac
agccacttgcagggagaggtctttcgagctgtcctgcgccaggagactgagttttttgcg
cagaaccaaacaggtgccatcacatctcgagtaacagataatacgtccaacgtgtgtgag
tctctgagcgagaaactgagtctcctgatgtggtacctggtgcgagggctgtgtctcttg
gggttcatgctctgggggtcactgtccctcaccatggtcaccttggccttcctgcctgtg
cttatccttctgcctgcgaagatgggagaactgtacaagtcagtggaagtacagaagcgg
aaagctctggcagaggcaagccaagtagccattgaggccctatcagctatgcctacagtg
cggagctttgccaatgaggagggagaggcccagaagtttaggaataaactggaagaactg
aagacactcagccagaaggaggccctgggccttgtagccaacgtctggaccaccagtatc
tcagggatgctgctgaaagtgggcattctgtacctcggcgggaagctggtgacaagaggg
gctctaagcagtgggaaccttgtcacatttgttctctaccagatccagttcaccacagct
gtggaggtactgctgaactactaccccgaggtccagaaggctgtgggctcctcagaagaa
gtatttgagtacctggaccgaacgcctcgctgcctgcccagtggtttgttgtccccctta
aacattcagggccttgtccagttccaagatgtctcctttgcttattcaagctgtccggac
gccccagtactgcaggggctgacgttcaccctgcgtcctggggaggtgacagcgctggtg
ggacccaatgggtcagggaagagcaccgtggctgccctgctgcagaacctgtaccagccc
acccaggggcaggtgctgctggatggagagcccatctcccagtatgagcaccgctacctg
cacagacaagtggctgctgtgggacaagaaccacaactgtttggcagaagcgtgcgagag
aatattgcttatggcctgatcgagaaaccacctctggaggaaatcatggcggctgcactg
gagtctggcgcccatcatttcatctgtagactccctcagggttacgacacagaggcaggt
gaggatggaagccagctgtcgggagggcagcgtcaggcagtggccatggcccgagcactg
atccggaagccttgtgtactcatcctggatgatgccaccagtgctctggatgctgatagc
cggttacgggtccagcagctcctgtacacaagccctacacggcactctcgctcggtgctt
ctcatcacccagcatctcagcttggtggagcaggctgaccacatcctctttctgaaagga
ggtgccatctgtgagcagggcacccaccagcagctcatggagaagaggggattgtactgg
gccatggtggaggcttctgcagctgctccagagtga
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