Dipodomys spectabilis (banner-tailed kangaroo rat): 122113224
Help
Entry
122113224 CDS
T07891
Symbol
Mtr
Name
(RefSeq) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00270
Cysteine and methionine metabolism
dsp00450
Selenocompound metabolism
dsp00670
One carbon pool by folate
dsp01100
Metabolic pathways
dsp01230
Biosynthesis of amino acids
dsp04980
Cobalamin transport and metabolism
dsp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122113224 (Mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122113224 (Mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122113224 (Mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122113224 (Mtr)
04980 Cobalamin transport and metabolism
122113224 (Mtr)
Enzymes [BR:
dsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
122113224 (Mtr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-GeneID:
122113224
NCBI-ProteinID:
XP_042542127
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MSPALSQPGAPKKAQQDEIEAILQKRILVLDGGMGTMIQRYKLSEESFQGQEFKDHARPL
KGNNDILSITQPDIIYQIHKEYLLAGADIIETNTFSSTSIAQADYGLEHLAYRMNKCSAH
VARKAAEEVTLQTGIKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYQEQARGL
LDGGVDILLVETIFDTANAKAALFALQNLFEEDYAPRPIFISGTIVDKSGRTLSGQTGEA
FVISVSHADPLCIGLNCALGATEMRPFIETIGKCTTAYVLCYPNAGLPNTFGDYDETPSI
MAAHLKDFAVDGLVNVVGGCCGTTPDHIREIAEAVKNCKPRVPPAVVFEEHMLLAGLEPF
RIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALTVAKAQVEMGAQVLDINMDDGMLD
GPSAMTRFCNFIASEPDIAKVPLCIDSSNFGVVEAGLKCCQGKCIVNSISLKEGEDDFLE
KARKIKKFGAAVVIMAFDEQGQATETDIKINVCTRAYHLLVKKLGFNPNDIIFDPNILTI
GTGMEEHNLYAINFIQATRVIKETLPGVRISGGLSNLSFSFRGMDAIREAMHSVFLYHAI
KCGMDMGIVNAGNLPVYDDIHKELLQLCEDLIWNKDPEATEKLLRYAQTHGKGGKKVIQT
DEWRSSPVEERLEYALVKGIEKYVIEDTEEARLSQDKYPRPLNIIEGPLMNGMKVVGDLF
GAGKMFLPQVIKSARVMKKAVGHLIPFMEKEREENRALNGTVEEEDPYQGTIVLATVKGD
VHDIGKNIVGVVLGCNNFRVIDLGVMTPCDKILKAALDHKADIIGLSGLITPSLDEMIFV
AKEMERLAIKIPLLIGGATTSRTHTAVKIAPRYSAPVIHVLDASKSVVVCSQLLDENVKD
EYFEEIMEEYEDIRQDHYESLKERKYLPLSQARKNGFHIDWLSEPHPVKPTFLGTRVFAD
YDLQKLVDYIDWKPFFDVWQLRGKYPNRGFPKIFHDKTVGEEARKVYDDAQAMLNVLISE
RKLQARGVVGFWPAQSVQDDIHLYAAGAEPRASEPIATFYGLRQQAEKDSASTDPYLCLS
DFVAPLDSGVTDYLGLFAVACFGVEELSKAYEDQGDDYCSIMVKALGDRLAEAFAEELHE
RVRRELWAYCSSEQLGTTDLRRLRYQGIRPAPGYPSQPDHTEKLTMWNLAGIEQATGIKL
TESLAMAPASAVSGLYFSNLKSKYFAVGKISKDQIADYASRKNMPVTEVEKWLGPILGYD
TD
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgcgctgtcgcaacccggtgcgccgaagaaagcccagcaggatgagattgaa
gccattctccagaaaaggattctggtgctggatggagggatggggaccatgattcagcgg
tacaagctcagtgaagaaagcttccaaggtcaagagtttaaagaccatgccaggcccctg
aaaggcaacaatgacattttaagtataacccaacccgatatcatttaccaaatccataag
gagtacttgttggctggagcagatatcattgaaacaaatactttcagcagtactagcatt
gcccaagctgactatggccttgaacacttggcctaccggatgaacaaatgctctgcacac
gtggccagaaaagcagcagaggaggtaacactccagacaggtatcaagaggtttgtggca
ggagctttgggtccaactaataagaccctgtctgtgtctccatctgtggaaagaccagat
tataggaatatcacatttgatgagctcgttgaagcgtaccaagagcaggctcgaggactt
ctggatgggggagttgacatcctgcttgttgaaacgatttttgacactgccaatgctaag
gcagctttgtttgcactccagaatctttttgaagaggattatgctccccggcctattttt
atctcagggaccattgttgataagagcgggcggactctctctggacagacgggagaggcc
tttgtcatcagtgtgtctcatgcagatcccctgtgcattggattaaattgtgctctgggt
gcaactgaaatgagacctttcattgagacaattggaaaatgtaccacagcctatgtcctc
tgttatcctaatgcaggccttcccaacacgtttggtgactatgatgaaacaccttccatc
atggccgcacacctgaaggacttcgctgtggatggcctggtcaacgtggttggggggtgc
tgcgggaccacaccagatcacatcagggaaattgctgaagctgtgaaaaattgtaagcct
cgagtcccccctgctgtggtttttgaagaacatatgttactggctggtctagaacccttc
aggatcggaccctacaccaacttcgttaacattggtgagcgctgtaacgtggcaggatcc
aggaagtttgctaaactcatcatggcaggaaactatgaagaagccctgactgttgccaaa
gcgcaggtagaaatgggagcccaggtgctggacatcaacatggacgatggcatgctggat
gggccaagtgcaatgaccagattttgcaacttcattgcttctgagcctgacattgccaag
gtccccttgtgcatcgactcgtccaattttggggtggttgaagcgggactgaagtgctgc
caagggaagtgcatcgtcaacagcattagtctgaaggagggagaggatgacttcctggag
aaggccaggaagatcaagaagtttggagctgctgtggtgatcatggcttttgatgaacaa
ggacaggcaacagaaacagacatcaaaattaatgtgtgtacacgagcctaccatctcctt
gtgaagaaactgggctttaatccaaatgacatcatctttgaccccaacatcctcaccatc
ggtacagggatggaggagcacaacctgtatgccatcaatttcatccaggccacacgggtc
atcaaagaaaccttgcccggagtgagaataagtggaggtctttccaacttgtccttctcc
ttccgaggaatggatgccattcgagaggccatgcatagcgtctttctttaccacgccatc
aagtgtggtatggacatggggattgtgaacgccggcaacctccctgtgtatgatgacatc
cacaaggaactgctccagctctgtgaagacctcatctggaataaagaccccgaggccacc
gagaagctcctgcggtatgcccagactcatggcaaaggagggaagaaagtcattcagacg
gacgagtggcggagcagccctgtggaagagcgcctggagtatgcgctggtgaagggcatt
gaaaaatacgttattgaggatactgaggaggccagactaagccaggacaaatatccccga
cctctgaatataatcgaaggacccctgatgaatggcatgaaagttgttggtgatcttttt
ggagccggaaaaatgtttctacctcaggtaataaagtcagctcgggtgatgaagaaggcc
gttggccaccttatccccttcatggaaaaagaacgagaagaaaacagagcgctcaatggc
actgtggaagaagaggacccctaccaaggcaccatcgtactggccactgtcaagggcgac
gtccatgatattggcaagaacattgtgggcgtggtcctgggctgcaataacttcagagtt
attgatttaggcgtcatgactccctgcgataagatcctgaaagctgcccttgaccacaaa
gcagatataattggcctgtcaggactcatcactccttccttggatgaaatgatttttgtt
gccaaggaaatggaaagattagctatcaagattccgctgttgattggaggcgccaccact
tccagaacccacaccgcagtgaaaatagctccacggtacagtgcgcccgtgatccacgtc
ctggatgcatctaagagtgtggtggtgtgttctcagctgttagatgaaaacgttaaggac
gagtactttgaggaaatcatggaagaatatgaagatattagacaggaccattacgaatct
ctcaaagagaggaaatacttaccattaagtcaagccaggaaaaatggcttccacattgat
tggctgtccgaacctcacccagtgaagcccaccttccttggcacccgggttttcgcggac
tatgacctgcagaagctggtggactacattgactggaagcctttctttgacgtatggcag
ctccggggcaagtaccccaaccgaggcttccccaagatatttcatgacaagaccgtgggt
gaagaggccagaaaggtgtacgatgatgcccaggccatgctgaacgtcttgattagtgag
aggaaactccaggccaggggtgtggttggcttctggccagcgcagagtgtccaggacgac
atccacctgtacgcagcaggggcagagcccagggcctcagagcccatagccaccttctac
gggctgaggcagcaggccgagaaggactccgccagcacggacccgtacctctgcctctcc
gactttgtcgcgcccctggactccggcgtcacagactacctggggctgtttgccgtcgcc
tgcttcggggtggaggagctgagcaaggcctacgaggaccagggtgacgactactgcagc
atcatggtcaaggcgctgggggaccggctggctgaggcctttgccgaggagctgcacgag
cgggtgcgccgcgagctgtgggcgtactgcagcagcgagcagctgggcaccacggacctg
cgcaggctccggtaccagggcatccggccggcgcccggctaccctagccagcctgaccac
acggagaagctcaccatgtggaacctcgcagggatcgagcaggccacaggcattaagttg
acggagtccttggcaatggcccctgcctcggcagtttctggcctctacttctccaacctg
aagtccaaatactttgccgtggggaaaatttccaaggatcagatcgcagattatgcttcg
aggaagaacatgcctgtgacagaggtggagaaatggcttggccccattttgggatatgac
acagactaa
DBGET
integrated database retrieval system
