Dipodomys spectabilis (banner-tailed kangaroo rat): 122113534
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Entry
122113534 CDS
T07891
Symbol
Plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp00310
Lysine degradation
dsp00514
Other types of O-glycan biosynthesis
dsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122113534 (Plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122113534 (Plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dsp01003
]
122113534 (Plod3)
Enzymes [BR:
dsp01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
122113534 (Plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122113534 (Plod3)
2.4.1.66 procollagen glucosyltransferase
122113534 (Plod3)
Glycosyltransferases [BR:
dsp01003
]
O-Glycan biosynthesis
O-linked Gal type
122113534 (Plod3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
2OG-FeII_Oxy
Anp1
2OG-FeII_Oxy_3
Glycos_transf_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
122113534
NCBI-ProteinID:
XP_042542475
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MAACGLRPRLLLLMLLPLLLLLLPPPTVRASASDRDRPRGGNVVNPEKLLVITVATAETE
GYLRFLQSAKFFNYTVRTLGLGQEWRGGDVARTVGGGQKVRWLKKEMEKYAEREDMVIMF
VDSYDVLLAGSPSELLKKFIQTGSRLLFSAEAFCWPEWGLAEQYPEVGSGKRFLNSGGFI
GFAPTIHQIVRQWKYKDDDDDQLFYTRLYLDPGLREKLSLNLDHKSRIFQNLNGALDEVV
LKFDRNRVRIRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNGWTPQGGCGFCNQHRRTLE
GSQPAPRVLLAVFVEQPTPFLPRFLQRLLHLDYPPDRVALFLHNAEVYHEPHVADAWPQL
QDHFSAAKLVGPEEALGPGEARDMAMDHCRQDPECEFYFSLDADAVLTNPQTLRLLIEHN
RKVIAPMLSRHGKLWSNFWGALSPDEYYARSEDYVELVQRKRVGVWNVPYIAQAYVIRGD
TLRTELPQRDVFSDSDTDPDMAFCKSLRDRGIFLHLSNQHEFGRLLATSRYDTDHLHPDL
WQIFDNPVDWREIYIHENYSRALHGEGLVEQPCPDVYWFPLLSEQMCDELVEEMENFGQW
SGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLLRTYVGPMTENLFPGYHTKTRAVM
NFVVRYRPDEQPALQPHHDSSTFTLNVALNHKGRDYEGGGCRFLRYNCIISSPRKGWGLL
HPGRLTHYHEGLPTTRGTRYIMVSFVDP
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtgcggcctgcgaccccggctcctcctcctcatgctgctgccgctgctgcta
ctgctgctgccgccccccacagtccgtgcctcagcctccgaccgggaccggccccggggc
gggaacgtggtcaaccccgagaagctgttggtgatcaccgtggccacagcagaaacagag
ggatatttgcgcttcctgcagtctgcaaagtttttcaactacactgtgcgaaccctgggc
ctgggacaggagtggcgagggggcgatgtggctcggacagttggtggaggccagaaggtc
aggtggctaaagaaggaaatggagaagtatgcagaaagagaggacatggtcatcatgttt
gtggacagctatgatgttcttctggcgggcagcccctcagagctgctgaagaagtttatc
cagactggcagccgcctgctcttctccgcagaggccttctgctggcccgagtggggcctg
gcggagcagtaccccgaggtgggctctggcaagcgctttctcaactccggtggcttcatc
ggttttgcccccaccatccaccaaattgtccgtcagtggaaatacaaggatgatgatgat
gaccaattgttctatactcggctctacctggacccagggctgcgggagaaactcagcctt
aatctggaccataaatcccggatcttccagaacctcaatggggctttagatgaggtggtc
ttaaagtttgatcggaatcgtgtaaggatccggaacgtggcctacgatacgcttcctgta
gtggtccatggaaacggccccacgaagctgcagctgaactatctgggcaactacgtcccc
aatggctggacgccccaggggggctgtggcttctgtaaccagcatcggaggactctcgag
ggaagccagcctgcgccccgggtgctcctggccgtgtttgtggagcagccgaccccgttc
ctgccccgcttcctgcagcgcctgttgcatctggactacccccccgaccgtgtggcgctc
ttcctacacaacgctgaggtgtaccatgaaccgcatgtcgccgacgcctggccacagctc
caagaccacttctcagccgcgaagctggtggggccggaggaggcgctgggccccggggaa
gccagggacatggccatggaccactgccggcaggaccccgagtgcgaattctacttcagc
ctggacgccgatgccgtcctcaccaacccacaaaccctgcgcctcctcattgagcacaac
aggaaggtgatcgcccccatgctgtcccggcatggcaagctgtggtccaatttctggggg
gccctgagccccgatgaatactacgcccgctccgaggactatgtggagctggtgcagcgg
aagcgagtgggcgtctggaacgtgccctacatagcccaggcctatgtgatccgcggggac
acgctgaggactgagctaccccagagggacgtgttctcagacagcgacacagaccccgac
atggccttctgcaagagcctgcgggacaggggcatcttcctccacctcagcaaccagcat
gagttcggccggctcctggccacttcccggtatgacacagaccacctacaccccgatctc
tggcaaatcttcgacaaccctgtggactggagagaaatatacatccacgagaactacagc
cgcgctctgcacggggagggcctggtggaacagccctgtccagatgtgtactggttcccg
ctgctctcggagcagatgtgtgacgagctggtggaggagatggagaactttggccagtgg
tcaggaggccggcacgaggattcaaggctggctggtggctacgagaacgtgcccaccgtg
gatatccacatgaagcaggtgggctacgaggaccagtggctgcagctgctcaggacctat
gtggggcccatgaccgagaacctcttcccaggctaccacaccaagacccgggccgtgatg
aacttcgtggtccgctaccggccagatgagcagcccgcgctgcagccccatcacgactcc
tccaccttcaccctcaacgtggccctcaaccacaaaggccgggactatgagggaggcggc
tgccgtttcctgcgctacaactgcatcatctcgtccccgagaaaaggctgggggcttcta
cacccaggccgcctcacccactaccacgaggggctgcccacgacgcggggcacgcgctac
atcatggtgtccttcgttgacccctga
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