KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122117775
Entry
122117775         CDS       T07891                                 
Symbol
Traf6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04010  MAPK signaling pathway
dsp04064  NF-kappa B signaling pathway
dsp04120  Ubiquitin mediated proteolysis
dsp04140  Autophagy - animal
dsp04144  Endocytosis
dsp04380  Osteoclast differentiation
dsp04620  Toll-like receptor signaling pathway
dsp04621  NOD-like receptor signaling pathway
dsp04622  RIG-I-like receptor signaling pathway
dsp04657  IL-17 signaling pathway
dsp04722  Neurotrophin signaling pathway
dsp04936  Alcoholic liver disease
dsp05132  Salmonella infection
dsp05133  Pertussis
dsp05135  Yersinia infection
dsp05140  Leishmaniasis
dsp05142  Chagas disease
dsp05145  Toxoplasmosis
dsp05152  Tuberculosis
dsp05160  Hepatitis C
dsp05161  Hepatitis B
dsp05162  Measles
dsp05168  Herpes simplex virus 1 infection
dsp05169  Epstein-Barr virus infection
dsp05170  Human immunodeficiency virus 1 infection
dsp05171  Coronavirus disease - COVID-19
dsp05200  Pathways in cancer
dsp05222  Small cell lung cancer
dsp05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
dsp05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122117775 (Traf6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    122117775 (Traf6)
   04064 NF-kappa B signaling pathway
    122117775 (Traf6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122117775 (Traf6)
   04140 Autophagy - animal
    122117775 (Traf6)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    122117775 (Traf6)
   04621 NOD-like receptor signaling pathway
    122117775 (Traf6)
   04622 RIG-I-like receptor signaling pathway
    122117775 (Traf6)
   04657 IL-17 signaling pathway
    122117775 (Traf6)
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    122117775 (Traf6)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    122117775 (Traf6)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122117775 (Traf6)
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    122117775 (Traf6)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    122117775 (Traf6)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    122117775 (Traf6)
   05161 Hepatitis B
    122117775 (Traf6)
   05160 Hepatitis C
    122117775 (Traf6)
   05171 Coronavirus disease - COVID-19
    122117775 (Traf6)
   05162 Measles
    122117775 (Traf6)
   05168 Herpes simplex virus 1 infection
    122117775 (Traf6)
   05169 Epstein-Barr virus infection
    122117775 (Traf6)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122117775 (Traf6)
   05135 Yersinia infection
    122117775 (Traf6)
   05133 Pertussis
    122117775 (Traf6)
   05152 Tuberculosis
    122117775 (Traf6)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    122117775 (Traf6)
   05140 Leishmaniasis
    122117775 (Traf6)
   05142 Chagas disease
    122117775 (Traf6)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    122117775 (Traf6)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    122117775 (Traf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsp04131]
    122117775 (Traf6)
   04121 Ubiquitin system [BR:dsp04121]
    122117775 (Traf6)
Enzymes [BR:dsp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122117775 (Traf6)
Membrane trafficking [BR:dsp04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    122117775 (Traf6)
Ubiquitin system [BR:dsp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    122117775 (Traf6)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX TRAF3_RING RING_XB3-XBAT31 zf-RING_11 Spc29 U-box DUF4455 Sina_ZnF DUF16 EzrA DUF7310 TMF_DNA_bd Myosin_tail_1 PspA_IM30 Lzipper-MIP1
Other DBs
NCBI-GeneID: 122117775
NCBI-ProteinID: XP_042547535
LinkDB
Position
Unknown
AA seq 552 aa
MYKKSSKAFVPGYFYRAVDNQVTMSLLNCERSCGSSQSESDCCAAMASSCSATAKDDSVS
GPPSTGNLSSSFMEEIQGYDVEFDPPLESKYECPICLMALREAVQTPCGHRFCKACIIKS
IRDAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNKGCLHKMELRHLEDHQAHCEF
ALMNCPQCQRPLPKFQFNIHVLEDCPRRQVSCINCAVSMAFEDKEIHDQNCPLANVICEY
CNTMLIREQMPNHYDLDCPTAPIPCTFSTFGCHEKMQRNHLARHLQENTQSHMRMLAQAV
HSINLALPSYDTSLPRAYDPDVRTFMETIQQLEGRLVRQDHQIRELTAKMETQSMYVSEL
KRTIRTLEDKVAEIEAQQCNGIYIWKICNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLC
MRLHLQLPTAQRCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSETPIRQNHEEVM
DAKPELLAFQRPTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRK
EGFQPRSTDTGV
NT seq 1659 nt   +upstreamnt  +downstreamnt
atgtataaaaaaagcagtaaagcatttgttcctgggtatttttacagagcagtcgacaat
caagtgactatgagtctgttaaactgtgaacgcagctgtgggtccagccagtctgaaagt
gactgctgtgccgccatggccagctcctgcagcgctacagcgaaagatgacagtgtaagt
ggtcctcccagcacagggaacctctccagctcctttatggaagagatccagggctacgat
gtagagtttgatccaccattggaaagcaaatatgaatgccccatttgcttgatggcatta
cgggaagctgtgcagacaccatgcggccacaggttctgcaaagcctgcatcatcaaatcc
ataagggatgcaggtcacaagtgtcctgtggacaatgagatcctgttggaaaaccaacta
tttcctgacaattttgcaaaacgagagattctttctctcatggtcaagtgtccaaataaa
ggctgtctgcacaaaatggagctgagacatcttgaggatcatcaagctcattgcgagttt
gctcttatgaattgtccccaatgccagcgtcccttgccaaaattccaatttaatattcac
gtgttggaggattgtccaagaagacaagtttcttgtataaactgtgctgtatccatggca
tttgaagataaagagattcatgaccagaactgtcctttggcaaatgtcatctgtgaatac
tgtaacaccatgctcatcagagaacagatgcctaatcattacgatctggactgccccaca
gccccaatcccatgcacattcagtacctttggttgccatgaaaagatgcagagaaatcac
ttggcacgccatctacaagagaatacgcagtctcacatgagaatgttggcccaggctgtt
catagcataaaccttgctttaccctcatatgatacctctttgccacgggcttatgaccca
gatgttcggaccttcatggaaaccattcagcagttagaaggtcgccttgtaagacaggac
catcaaatccgggagctgactgctaaaatggaaactcagagtatgtatgtcagtgagctc
aaacgaaccatacgaacccttgaggacaaagttgctgaaattgaagcacagcagtgcaat
gggatttacatttggaagatctgcaactttgggatgcacttaaaatctcaagaagaagag
aaacctgttgtcattcatagccctggtttctatacaggcaaacctgggtacaaactctgc
atgcgcctgcatctgcagttgccaactgctcaacgctgtgccaactatatatccctcttt
gtccacaccatgcaaggcgagtatgacagccacctcccctggcccttccaaggtacaata
cgccttacaattcttgatcagtctgaaacaccaataaggcaaaaccatgaagaggtaatg
gatgccaaaccagaactccttgccttccaacgacccaccatcccacggaaccccaaaggt
tttggctatgtaacatttatgcatctcgaagccttaagacagagaaccttcattaaggat
gatacgttattagtacgctgtgaagtttccacccgctttgacatgggaagccttcgaaag
gagggcttccagccacgaagtactgacacaggggtgtaa

DBGET integrated database retrieval system