Dipodomys spectabilis (banner-tailed kangaroo rat): 122118088
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Entry
122118088 CDS
T07891
Name
(RefSeq) protocadherin gamma-C4
KO
K16497
protocadherin gamma subfamily C
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dsp04515
]
122118088
Cell adhesion molecules [BR:
dsp04515
]
Cadherins
Protocadherins
122118088
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
122118088
NCBI-ProteinID:
XP_042547892
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MAAMLRKVRSWVEIWREATLLFLFCHLGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTE
SLSARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSASCIVPLEFVTEGPLEMY
RAEVEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEH
FALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVND
NAPAFQQPSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFSFSGHTPDRVRNLFSLHP
TTGKLTLQGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPHITVTSELG
TLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSAFRNQFSLVTAGPLDREA
KSSYDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSL
AASDPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQA
RDRGNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLVTKVTAVD
LDSGYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPIPADLPPQKLVIVVKDSGSPPLST
SVTLLVSLEEDTHPIVPDLRESSAPREGESRLTLYLAVSLVAICFVSFGSFVVLLSKCLR
GAACGVTCFPAGTCACLTRSRRREGLPPSNGILRIQLGSDDPIKFVDVGGHSHGCTPLAS
APTRSDSFMMVKSPSAPMAGEPVRPSCPPSDLLYGLEVRPWWAQSVLEGCSDPGIWLGHI
PETTGLPVRPHGDGTIFVSSYYLNNYMVDAMLYKCFVA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaatgctccgcaaggtgagaagctgggtagagatctggcgtgaggctaccctt
ttgttcctcttttgccacctgggttacgtttgtgggcagatccgctacccggtcccagag
gagtcacaggaagggacttttgtagggaatgtcgcccaagatttcctgctggatacagag
agtctgtcagctcgcaggctgcaggtcgctggagaggtgaaccaaagacactttcgggtg
gatttggacagcggtgccctgctcatcaagaatccaatcgatcgagaggcactgtgtggg
ctcagtgccagctgcatcgtgcccctggagtttgtaaccgaagggcctttggaaatgtac
cgagccgaggtagagatcgtagatgtgaatgatcacgccccccgatttccgcggcagcag
ttggacttggaaatcggggaggcagctcctccaggacagcgtttccccttggaaaaggct
caggatgcagatgtgggaagcaattccattagcagctatagactaagctccaatgagcat
tttgcactggatgtcaagaagcgcagcgacggcagcctggtaccagagctgctcctggag
aagcctttggatcgggagaagcaatcggactaccgcctagtgctgaccgctgtggatgga
gggaacccccctagatctggcacagcggagctccgggtatctgttctggatgtaaacgac
aacgccccggccttccagcaacccagctacaggatcagcgtgttagagagcgcgccagcg
ggcatggtgctcatccagctcaatgcctctgacccagacctgggtcctagtggtaacgtc
accttttctttcagtggtcacacccctgatcgtgtgaggaacctttttagcctgcatccc
actactgggaagctgacccttcaggggcccctagactttgagagcgagaattactatgaa
tttgatgtgcgggcgcgtgatggaggctctccagccatggagcaacattgtagcctgagg
gtggacctcctggatgtaaacgacaacgccccccacatcaccgtcacttcggagcttggg
actctcccagagagcgcagaacctggcactgtggtggcactcatcagtgtgcaggatccc
gactcggggtcaaatggagatgtgagtctgcgtattcctgaccacttgccatttgccctc
aagtctgccttcaggaaccaattctccctcgtaactgctgggcccctggaccgggaggct
aaatccagttatgacatcatggtcactgcttcagatgctgggaaccctcctctgagtacc
cacaggactattttcctcaacatttcagatgtgaatgataacccaccctctttcttccag
aggtcacatgaggtgtttgttcctgagaacaatcgccctggggacctgctttgctccctt
gcagcctctgacccagactctggcttgaatgcgctcatttcctattctctcttagagcct
agaaatcgagatgtgtcagcttcttctttcatctctctgaacccccagacaggagctgtt
cacgcaactcgatcatttgactatgagcaaacacagacactgcagtttgaagttcaagcc
cgggacagaggcaacccacctcttagcagcactgtgacagttcggctatttgtgctggac
ctcaatgacaatgccccagctgtgctccgccctagggccaggcctggctccttatgtccc
caagcactgcccccatcagttggtgctggtcacctagtcacaaaggtgactgctgtggac
ttggattcaggttacaatgcttgggtctcctatcagcttctggaggccccagatcccagc
ttgtttgcagtgtctagatatgctggggaggtgcggacagctgttcccatcccagctgac
ctcccaccacaaaaactggtcattgtggtgaaagacagtggtagcccaccactgtctacc
tctgttactctcctagtgtccttagaggaagacacccatccaattgtccccgatcttcga
gaatcttcagctccaagggaaggagagtcccgcctgaccctctacttagctgtgtcccta
gtggcgatttgctttgtctcctttggctcatttgtggtgctactctctaagtgtcttcgt
ggggctgcctgcggagtaacatgctttcctgctggcacttgtgcctgtctcaccagatct
cgaaggagggagggacttcctccttccaatgggattctccgaatccagctagggtcagat
gatcctatcaagtttgtggatgtgggaggccactctcatggctgtacacccttggcttct
gcacccactcggagtgatagcttcatgatggtgaagtcacccagtgcacctatggcaggg
gaacctgttcgcccaagctgtccaccctctgatcttctctatgggctagaggtgagaccc
tggtgggctcagtcagtgcttgagggttgttctgatccaggcatatggctgggccacatc
ccagagactactggcctccctgtgagaccacatggtgacggcaccatttttgtgagtagt
tactatttgaataattatatggtagatgctatgctttacaagtgttttgtggcataa
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