Dipodomys spectabilis (banner-tailed kangaroo rat): 122118773
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Entry
122118773 CDS
T07891
Symbol
Abcd4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp02010
ABC transporters
dsp04146
Peroxisome
dsp04977
Vitamin digestion and absorption
dsp04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122118773 (Abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122118773 (Abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
122118773 (Abcd4)
04980 Cobalamin transport and metabolism
122118773 (Abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122118773 (Abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsp02000
]
122118773 (Abcd4)
Enzymes [BR:
dsp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
122118773 (Abcd4)
Membrane trafficking [BR:
dsp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122118773 (Abcd4)
Transporters [BR:
dsp02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
122118773 (Abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
SbmA_BacA
AAA_16
AAA_30
AAA_22
DLIC
DEAD
ATP-synt_ab
RsgA_GTPase
CoV_E
Motif
Other DBs
NCBI-GeneID:
122118773
NCBI-ProteinID:
XP_042548649
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MAVPGPAPGAGARPRLDLQFLQRFLRIQKVLFPSWSSQNVLMFLTLLFVTLLEQLVIYQV
GVIPSQYYGVLGNKDLDGFKALTFLAVVFIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLH
RLYFRARVYYTLNVLQDGIDNPDQRISQDVERFCRQLSSMASKLIVSPFTLVYYTYQCFQ
STGWLGPVSIFGYFILGTMVNKTLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYR
AGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGVNTFDYLGSILSYVVIAIPIFSGVYGD
LSPTELSTLVSKNAFVCMYLINCFTRLIDLSTTFSDVAGYTHRIGELQEALLDMSQKSQD
CETLRETEWGLDKACGWPAAEPADTAFLLERVSICAPSSDKPLVKDLSLKICEGQSLLIM
GNTGTGKTSLLRVLGGLWDSTKGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKE
IYPDSGSADDERIMRFLELAGLSSLVARTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHRPNLEKFHSWVLKLYGGGRWEL
TRIKVE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccggggcccgcgcccggagctggcgctaggcctaggttagatctgcaattt
ctccagcggttcctgagaatacagaaggttttgtttccttcctggtcatcacagaatgtc
ttgatgttcctgactctcttgtttgtgactctactggaacaactggtgatataccaggtt
ggcgtgatccccagtcagtactatggggtcctgggaaacaaagacttggatgggtttaag
gcactgacattcctggctgttgtgttcatcgttctcaactccacactgaagagttttgac
cagttcacctgcaacctgctgtatgtgagctggaggaaggacctcactgagcacctgcac
cgcctctactttcgggcccgtgtgtactacaccctcaatgtgcttcaggatggcatcgat
aacccggatcagcgtatcagccaggatgtggagcgattctgccggcagctcagcagcatg
gcgagcaaactgattgtctccccctttacactcgtctattacacataccagtgcttccaa
agcacaggctggcttgggccggtgagcatcttcgggtatttcatcctgggaaccatggtg
aacaaaaccctgatgggacctatcgtggcgaagctggtgcagcaagagaagctggagggg
gattttaggttcaagcacatgcagattcgggtgaacgctgagcctgctgctttctacaga
gccgggcatgtggaacacatgaggacagaccgcaggctgcagagactccttcagacccag
agggagctgatgtccaaggagctctggctgtacattggtgtcaacacctttgactatctg
ggcagcatcctgagttacgttgtcatcgcaatccccatcttcagtggggtctatggagac
ctgagccccacagagcttagcacgctggtcagcaagaatgcctttgtgtgcatgtacctc
atcaactgcttcacccgcctcatcgacctctccaccacattctcagatgtggctggttac
acgcaccggatcggggagcttcaggaggccctgctggacatgtctcagaagtcacaggac
tgcgagaccctgagagagaccgagtggggcttggacaaggcctgcggatggccagcagct
gagccagcagacacagcttttctccttgagcgagtctccatctgtgccccctcctctgac
aagcccctagtcaaggacctcagcctgaagatctgtgaggggcagagcctactcatcatg
ggcaacacgggcactggcaagacttccttgctgcgggttctgggcggcctgtgggacagc
acgaagggctctgtgcagatgctgaccgactttgggccccacggggtgctgttcctgcct
cagaagcccttcttcactgatgggacgcttcgggagcaggtgatatatcccctgaaggag
atctaccctgactcaggttctgctgatgatgagaggatcatgaggttcttggagctggca
ggcctgtccagcttggtggcaaggacagagggtctggaccagcaggtggattggaactgg
tatgatgtcctgtctccaggggagatgcagaggctttcctttgcacggctcttctacctg
cagccaaagtatgcagtgctggatgaagctaccagcgccctgaccgaggaggtggagagt
gagctctaccgaatcggccagcagctaggaatgacattcatcagcgtgggacatcgaccc
aacctggagaagtttcattcctgggttctgaaactctatggaggaggaagatgggaactg
actagaatcaaagtggaatga
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