KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122119822
Entry
122119822         CDS       T07891                                 
Symbol
Ldlr
Name
(RefSeq) low-density lipoprotein receptor
  KO
K12473  low-density lipoprotein receptor
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03272  Virion - Hepatitis viruses
dsp04144  Endocytosis
dsp04913  Ovarian steroidogenesis
dsp04925  Aldosterone synthesis and secretion
dsp04927  Cortisol synthesis and secretion
dsp04934  Cushing syndrome
dsp04976  Bile secretion
dsp04979  Cholesterol metabolism
dsp05145  Toxoplasmosis
dsp05160  Hepatitis C
dsp05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    122119822 (Ldlr)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    122119822 (Ldlr)
 09150 Organismal Systems
  09152 Endocrine system
   04913 Ovarian steroidogenesis
    122119822 (Ldlr)
   04925 Aldosterone synthesis and secretion
    122119822 (Ldlr)
   04927 Cortisol synthesis and secretion
    122119822 (Ldlr)
  09154 Digestive system
   04976 Bile secretion
    122119822 (Ldlr)
   04979 Cholesterol metabolism
    122119822 (Ldlr)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    122119822 (Ldlr)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    122119822 (Ldlr)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    122119822 (Ldlr)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    122119822 (Ldlr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dsp04131]
    122119822 (Ldlr)
Membrane trafficking [BR:dsp04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Low-density lipoprotein receptor (LDLR) family proteins
    122119822 (Ldlr)
SSDB
Motif
Pfam: Ldl_recept_a Ldl_recept_b FXa_inhibition cEGF EGF_CA SGL EGF EGF_3 hEGF NBP1 TMEM154
Other DBs
NCBI-GeneID: 122119822
NCBI-ProteinID: XP_042549831
LinkDB
Position
Unknown
AA seq 857 aa
MGTRGAELLCAAALLLAAAGAAAQDKCSRNEFQCRDGKCISRGWICDGRPECPDGSDESQ
ETCTSITCKASDFNCGGLVNHCIPQSWRCDGQKDCENGSDEQGCAPRTCAAEEFRCPDGR
CISRRFVCDRDRDCADGADERACPAPTCGPAHFRCNSSACIPELWACDRDPDCDDGSDEW
PQHCGAAAGGARGPCAALEFHCASGECVHISWRCDGGADCRDRSDEDGCAVTTCRPDEFR
CSDGTCIHGSRQCDREHDCRDMSDELGCANVTLCEGPNKFKCHSGECISMDKVCDSARDC
RDWSDEPIKECRTNECADNNGGCSHDCRDLKIGHQCLCPDGFRLVEQRRCEDIDECQEPD
MCSQRCVNLEGSYKCECETGFQMDPRTKTCKAVGSIAYLFFTNRHEVRMMALDYSEYISL
IPNLKNVVALDTEVANNRIYWSDISQKKIYSTQIDHAPSASYDTIINTDLKAPDGLAVDW
IHGHIYWTDSILGTVSVADTRGTKRKTLVQKSGSKPRAIVVDPVHGFMYWTDWGTPAKIE
KGGLNGVDVYSLVTENIQWPNGITLDLASGRLYWVDSKLHSISSIDVNGGNRKVILEDEK
QLAHPFSLAIFEEKVFWTDIIKEAIFSANRLTGSDVNLMAENLLSPEDIVLFHNITQPRG
VNWCEKTSLPNGGCEYLCLPAPQINPHSPKFTCACPDGILLAQDMRSCLPEAEPIPSTQR
PTTTKPAVSTTTGIPRHPDTPPPSSTSWSPATTAALTYAQSFTTSSQGQGDAAGRGLAEQ
RQGVGALSIVLPIALLVLICFVAFLVWKNWRLKNINSINFDNPVYQKTTEDEVHICRSQD
GYTYPSRQMVSLEEDLV
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggggacccgcggcgcggagctgctgtgcgccgccgcgctgctcctggctgcggcgggg
gctgcagcccaagacaaatgcagccggaatgagtttcagtgccgggatgggaaatgcatc
tccagagggtggatttgtgatggccgccccgagtgtcctgacggctccgatgaatcccag
gagacctgcacatctatcacctgcaaagccagtgacttcaattgcggaggccttgtcaac
cactgcatccctcagtcctggagatgtgacggccagaaggactgcgagaatggctcggat
gagcagggctgcgcgcccaggacctgcgcggccgaggagttccgctgccccgacggcagg
tgcatctcgcggcgcttcgtgtgcgaccgggaccgggactgcgcggacggcgcggacgag
cgcgcgtgcccggcgcccacctgcgggcccgcgcacttccgctgcaactcgtcggcctgc
atcccggagctgtgggcctgcgaccgggacccggactgcgacgacggctcggacgagtgg
ccgcagcactgcggggcggcggcgggcggcgcgcggggcccgtgcgcggcgctcgagttc
cactgcgccagcggcgagtgcgtgcacatcagctggcgctgcgacggcggcgccgactgc
cgcgaccggtcggacgaggacggctgcgctgtgaccacctgccggcctgacgagttccgg
tgctcggatgggacctgtatccacggcagccgccagtgtgaccgggagcatgactgcagg
gacatgagcgacgagctgggctgcgccaacgtgacgctgtgcgaaggtcccaacaagttc
aagtgccacagcggcgagtgcatcagcatggacaaagtgtgcgactcggccagggactgc
cgggactggtccgacgagcccatcaaggagtgcaggactaacgagtgtgcggacaacaat
gggggctgttctcatgactgccgggacctcaagatcggccaccagtgcctgtgtcctgac
ggcttccggctcgtggagcagcgcagatgtgaagatattgatgagtgtcaggagccggac
atgtgcagccagcgatgtgtgaacctggagggcagctacaaatgcgagtgcgagacaggc
ttccagatggacccccgcaccaaaacctgcaaggccgtgggctccatcgcctacctgttc
ttcaccaaccgtcatgaggtgaggatgatggcgctggactacagcgagtacatcagcctc
atccccaacttgaagaacgtggtcgctctggacaccgaggtggccaacaacagaatttac
tggtctgacatctcccaaaagaagatctacagcacccagatcgaccacgcccccagcgcg
tcctacgacaccatcatcaacacggacctcaaggccccggatggactggctgtggactgg
atccacggccacatctactggaccgattccatcctgggcaccgtgtccgtggccgacacc
aggggcaccaagaggaagacgctggtgcagaagagcggctccaagccgcgggccatcgtg
gtggacccggtgcacggctttatgtactggacagactggggcaccccggccaagatcgag
aaaggaggcctgaacggcgtggatgtgtactcgctggtgacagaaaacatccagtggccc
aatggcatcacactggatcttgccagtggccgcctctactgggttgattccaaactccat
tccatctccagcatcgacgtcaatggaggtaatcgaaaggtcatcttagaagatgagaag
caactggctcaccccttctccttggccatctttgaggaaaaggtattttggacggatatc
atcaaggaagccattttcagtgccaatcgcctcactggctctgatgtcaatttaatggcc
gaaaacctcttgtccccagaagatattgtcttgttccacaatatcacacagccgagagga
gtaaactggtgtgagaagacatctctccccaacggtggctgcgagtacctgtgtctaccc
gcccctcagatcaacccacactccccaaagttcacctgtgcctgtccggatggcatactg
ctggcccaggacatgaggagctgcctgccagaggctgagcctataccgagcacccagagg
ccaaccaccaccaaacctgcggtcagcactacaacagggatcccgaggcacccagacacc
ccgccaccttccagcacttcctggagccccgcaaccacagctgcgctcacctatgcacag
tccttcaccacgtcctctcaaggtcagggcgatgctgcgggcagagggctggcggagcag
cggcagggcgtgggggccctgtccatcgtgctccccatcgccctgctcgtcctcatctgc
ttcgtggccttcctggtgtggaagaactggcgcctgaagaatataaacagcatcaacttc
gacaaccccgtgtaccagaagacgacggaggatgaggtccacatctgccggagccaggac
ggctacacctacccctcgagacagatggtcagcctggaggaagacctggtgtga

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