KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122122261
Entry
122122261         CDS       T07891                                 
Symbol
Cxcl12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04060  Cytokine-cytokine receptor interaction
dsp04061  Viral protein interaction with cytokine and cytokine receptor
dsp04062  Chemokine signaling pathway
dsp04064  NF-kappa B signaling pathway
dsp04360  Axon guidance
dsp04670  Leukocyte transendothelial migration
dsp04672  Intestinal immune network for IgA production
dsp04810  Regulation of actin cytoskeleton
dsp05163  Human cytomegalovirus infection
dsp05200  Pathways in cancer
dsp05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    122122261 (Cxcl12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    122122261 (Cxcl12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    122122261 (Cxcl12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    122122261 (Cxcl12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    122122261 (Cxcl12)
   04672 Intestinal immune network for IgA production
    122122261 (Cxcl12)
   04062 Chemokine signaling pathway
    122122261 (Cxcl12)
  09158 Development and regeneration
   04360 Axon guidance
    122122261 (Cxcl12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    122122261 (Cxcl12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    122122261 (Cxcl12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    122122261 (Cxcl12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:dsp04052]
    122122261 (Cxcl12)
   00536 Glycosaminoglycan binding proteins [BR:dsp00536]
    122122261 (Cxcl12)
Cytokines and neuropeptides [BR:dsp04052]
 Cytokines
  Chemokines
   122122261 (Cxcl12)
Glycosaminoglycan binding proteins [BR:dsp00536]
 Heparan sulfate / Heparin
  Chemokines
   122122261 (Cxcl12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 122122261
NCBI-ProteinID: XP_042552280
LinkDB
Position
Unknown
AA seq 93 aa
MDPKVIAVLALVLAALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIV
ARLKSNNRQVCIDPKLKWIQEYLEKALNKRFKM
NT seq 282 nt   +upstreamnt  +downstreamnt
atggaccccaaggtcatcgccgtactggccctggtgctagccgcgctctgcctcagcgat
gggaaacctgtcagcctgagttaccgatgcccgtgccgattcttcgagagccatgttgcc
agagcaaatgtcaagcatctcaaaatcctcaacactccaaactgcgcccttcagattgtg
gcaaggctgaagagcaacaaccgacaggtgtgcattgaccccaagttaaagtggattcaa
gaatacctggagaaagctttaaacaagaggttcaagatgtga

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