Dipodomys spectabilis (banner-tailed kangaroo rat): 122122436
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Entry
122122436 CDS
T07891
Symbol
Ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122122436 (Ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
122122436 (Ltbp1)
Domain-containing proteins not elsewhere classified [BR:
dsp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
122122436 (Ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
122122436
NCBI-ProteinID:
XP_042552546
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MAGAWLRWGFVLWAVLLASASSAHGRVRRITYVVRPGPGLAAAAAMGAVPLGGPPRPRTF
NVALNARYSRSSAGAPSVAAAGPPSERTRRTGSAGSAALQRPERPGSPKPGGHPAATPFT
KQGRPVVRSKVAQGTQSGAGSRLQVHQKRQLQGVNVCGGQCCHGWSKAPGSQRCTKPSCV
PPCQNGGMCLRPQLCVCKPGTQGKACETAAAQETSSPIFGGQNPGVVSSWVLSEQAAKHT
SSKKADALPRVSPVAQMTLTLKPKPAIGLSQQIHSQVARLSSQNVMIHHGQTQEYVLKPK
YFPAQKLISGEQAMDGLLPLRFGQDPVASPFHLSNHTGRIKVVFTPSICKVTCTKGSCQN
SCEKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNFTGKLCQI
PVHGASVPKLYQHSQQPGKALGTHVIHSTHTLPLTMTSQQGVKVKFPPNIVNIHVKHPPE
ASVQIHQVSRIDGPTGQKVKESQPGQSQVSYQGLPAQKTQTAHSTYPHQQLLPHVYPVAA
KTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHAYSQMMEC
LQGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKRGFGPDATFSSCVPDPPVI
SEEKGPCYRLVSSGRQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGG
MGYTVSGVHRRRPIHHHVGKGPLFVKPKNTQPVAKSTHPPPLPAKEEPVEALTFSREHRP
GAAEPEVATAAPEKEIPSLDQEKTKLEPGQPQLSPGISTIHLHPQYPVVIEKTSPPVPVE
IAPEASTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYEGYKFSEQQRK
CVDIDECAHVQHLCSQGRCENTEGSFLCICPAGFMASEAGTNCIDVDECLRADVCGDGHC
VNTMGAFRCEYCDSGYRMTRRGRCEDIDECLTPSTCPDEQCVNSPGSYQCVPCTEGFRGW
NGQCVDVDECLEPNVCTNGSCANLEGSYMCSCHRGYSPTPDHRHCQDIDECQQGNLCMNG
QCKNTDGSFRCTCGQGYQLSAAEDQCEDIDECQYQHLCTHGQCRNTEGSFQCVCDQGYRA
SVLGDHCEDINECLEDKSVCQGGDCINTAGSYDCTCPAGFQINDNRQCQDINECEQPGLC
GLQGECLNTEGSFHCVCEQGFSISADGRTCEDIDECVNNTICDSHGFCDNTAGSFRCLCY
QGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADETQEYSPMTGQCRSRVS
EDVDVDQPREEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGT
AEFAEMCPGGKGFVPAGESSYNTGGENYKDADECVLFGQEICKNGFCLNTQPGYECYCKQ
GTYYDPVKLQCFDLDECQDPNSCVDGQCVNTEGSYNCFCTHPMVLDASEKRCIRPTESNE
QIEETDVYQDLCWEHLSDEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKDSDDYA
QLCNIPVSGRRQPYGRDALVDFSEQYAPEADPYFIQDRFLNSFEELQAEECGILNGCENG
RCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECDELNNRMSLCKNAKCINTEGSYKCLCLP
GFVPSDKPNYCTPLNTALSLEKDSDLE
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggcctggctcaggtgggggttcgtgctctgggcggtgctgctcgcgtccgcg
tcgtccgctcacggccgggtacggaggatcacctacgtggtgcgcccgggccccggcctg
gcggcggcggcggcgatgggcgccgtgcccctgggcgggcccccgcgcccgcggaccttc
aacgtcgccctaaacgctaggtacagccgcagctcggcgggcgcccccagcgtcgccgcg
gccgggcccccctccgagcgcacccggcgcacgggcagcgcgggcagcgcggccctgcag
cgacccgagcgccccggcagccccaagcctggcggtcatccggcggccaccccgttcacc
aagcaaggccgcccagtcgtgcgctccaaagtggctcaggggacccagagcggcgcgggc
tccaggctgcaggttcaccagaagcggcagctgcagggggtcaatgtctgcggagggcag
tgctgtcacggctggagcaaagctcccggctcccagaggtgcaccaaaccaagctgtgtc
ccaccatgccagaatggagggatgtgcctccggcctcagctctgtgtgtgtaaaccagga
acccagggcaaagcttgtgagacagcggctgcccaggagacctcatcaccaatctttgga
gggcagaatcctggggttgtctcctcttgggtcctttctgagcaagcagcaaagcacact
tcatccaagaaggcagacgctctaccaagagtcagtcccgtggcccagatgaccttgacc
ctcaagccgaagcctgccataggactctcccagcagatacattctcaagtggcacgtctt
tcctctcagaatgtgatgatccatcatggccagacgcaggaatatgtactcaagccgaag
tacttcccagcacagaagctcatctctggagaacaggccatggatggtttgctcccatta
agattcggacaggatccagtagcatccccttttcacttgagtaaccacactggccgcatc
aaggtggtctttactccgagcatctgtaaagtgacgtgcaccaagggcagctgtcagaac
agctgtgagaaggggaacaccaccactctcattagtgagaatggccatgctgccgacacc
ctgacagccacgaacttccgagtggtaatctgccatcttccatgtatgaatggtggacag
tgcagttcaagggacaaatgtcaatgccctccaaacttcacaggaaagctttgtcagatc
ccagtccatggtgccagtgtgcctaaactttaccaacattcccaacagccaggtaaagca
ctgggcacacatgtcatccattccacacataccttgcctctaaccatgaccagccaacaa
ggagtcaaagtgaaatttcctcccaacatagttaacatccacgtgaagcaccctcctgag
gcttccgtccagatacatcaggtttcaagaattgatggccccactggacagaaggtaaag
gaatctcagccaggccagtcccaagtatcataccaagggctccctgcccagaagacccag
acggcgcactccacataccctcaccagcagctcctcccacacgtctatccggtggctgcc
aagacacagcttggccgctgcttccaggaaaccatcgggtcacagtgtggcaaagctctt
cctggcctttcaaagcaagaggactgctgtggaactgtgggtacctcctggggctttaac
aaatgccagaaatgccccaagaagccatcttatcatgcatatagtcaaatgatggaatgc
ctacaaggttataagcgggttaacaacaccttttgtcaagatattaatgaatgtcagctg
caaggcgtgtgccccaatggtgagtgtttgaataccatgggcagctatcggtgcacctgc
aaaagaggatttgggccagatgctaccttttcaagttgtgttccggatccccctgtgatc
tcagaagagaaagggccctgctaccgacttgtcagttccggcaggcagtgtatgcaccct
ctgtctgttcacctcaccaagcagctctgctgttgtagtgtgggcaaggcctggggccca
cactgtgagaaatgtccccttccaggcacagctgcttttaaggaaatctgtcctggtgga
atgggttatacggtgtctggcgttcatagacgcaggccaatccatcaccatgtaggtaaa
ggacctctgtttgtcaagccaaagaacactcaacctgttgctaaaagtactcatcctcca
cctctcccagccaaggaagagccagtggaggccctgaccttctcccgggaacacaggcca
ggagcggccgagcccgaagtggcaactgcagcccctgagaaggaaataccttcactggat
caagagaaaaccaaactcgagcctgggcaaccccagctctctccaggcatttcaactatt
cacctgcacccacaatatccagtagtaattgaaaagacatctcccccagtgcccgtggaa
atcgcccctgaagcttctacttcaagtgccagccaagtgatcgcgcctactcaagtaaca
gaaatcaatgagtgcactgtgaaccctgacatctgtggagcaggccactgcattaacctg
cctgtgagatatacctgcatttgctatgagggctacaagttcagtgagcagcagaggaaa
tgcgttgatattgatgaatgtgctcatgtgcaacacctctgctcccagggacgctgtgaa
aacaccgaaggaagtttcttgtgtatttgcccagcaggatttatggccagtgaggcgggt
actaactgcatagatgtggatgagtgtctaagggccgatgtgtgtggggacggccactgt
gtgaacaccatgggggccttccggtgtgaatactgcgacagcggctaccggatgaccagg
aggggtcgttgtgaggatattgatgaatgcttgacaccaagtacttgtccagatgagcag
tgtgtgaattccccagggtcttaccagtgtgtcccctgcacggaaggcttccgaggctgg
aatggacaatgtgttgacgtggatgagtgcctggagccaaacgtctgcacgaacggttct
tgtgccaacctcgaaggatcctacatgtgctcatgccaccggggttacagcccaacacca
gaccacaggcactgtcaagatattgatgaatgccagcaagggaacctctgcatgaatggg
caatgtaagaacacggatggctccttccgctgcacctgtggccagggctaccagctgtcg
gcagctgaagaccagtgtgaagatattgacgaatgccagtaccagcacctgtgcactcat
gggcaatgcaggaacacagaaggttccttccagtgcgtgtgtgaccagggctacagagca
tcagtgcttggagaccactgtgaagatatcaacgaatgcttggaggataagagcgtttgc
cagggaggggactgcattaatactgcagggtcctatgactgcacctgcccagctggcttc
cagataaacgacaatagacaatgtcaagatattaatgaatgtgaacagccagggctctgc
ggtcttcagggggagtgtctgaacacagagggctctttccactgtgtctgtgaacagggc
ttttccatctccgcagatggccgtacatgtgaagatattgatgaatgtgtaaacaacact
atatgtgacagtcacgggttttgtgacaatacagctggctccttccgctgcctctgttat
cagggctttcaagccccacaggatgggcaagggtgtgtggatgtgaacgagtgtgagctg
ctcagtggtgtgtgtggagaagccttctgtgagaacgtggaagggtccttcctatgtgtg
tgtgcagacgaaacccaggagtacagccccatgaccgggcagtgtcgctcacgggtgtct
gaggatgtagacgtagatcaacccagagaggaaaagaaagaatgctactataacctcaac
gatgccagtctctgtgataatgtactggcccccaacgtcaccaaacaagaatgctgctgt
acatcaggagctggttggggagacaactgtgagatcttcccctgtccggtcctggggact
gccgagttcgcggaaatgtgtcctggagggaaaggatttgtccctgcaggagaatcatcc
tacaacacgggtggtgagaactacaaagatgctgatgaatgtgtactgtttggccaggaa
atctgcaaaaatggtttctgtttgaacactcagcctgggtacgaatgttactgtaagcag
ggaacgtactacgatcctgtgaaactgcagtgtttcgatctggacgaatgtcaagacccc
aacagttgtgttgatggccagtgcgtgaacacagaaggctcttacaactgcttctgtacc
catcccatggtcctggatgcttcagagaaaagatgcatacgtccaacagaatcaaatgaa
caaatagaagaaacggatgtctaccaggatctgtgctgggagcatctgagtgatgagtac
gtgtgcagccgtcctctcgtgggcaagcagaccacgtacaccgagtgctgctgcttgtac
ggcgaggcctggggcatgcagtgtgccctctgccccatgaaggactcagacgactacgcg
cagctgtgcaacatcccggtgagcggccggcggcagccctacggccgcgacgccctggtg
gacttcagcgagcagtacgccccggaggccgacccctacttcatccaggaccgatttttg
aatagctttgaggagctgcaggctgaggaatgtggcatcctgaacggatgtgaaaatggt
cgctgtgtgagggtccaagaaggctatacctgtgactgctttgatgggtaccacttggat
atggccaagatgacctgtgttgatgtcaacgaatgtgatgagttgaacaaccggatgtcc
ctgtgcaaaaatgccaagtgcattaacacggaaggctcctacaaatgtttgtgtctgcca
ggcttcgtaccttctgacaagcccaactactgcactccgttgaatactgccttgagtcta
gagaaagacagtgacctggagtaa
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integrated database retrieval system
