Dipodomys spectabilis (banner-tailed kangaroo rat): 122122466
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Entry
122122466 CDS
T07891
Symbol
Otof
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122122466 (Otof)
Membrane trafficking [BR:
dsp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122122466 (Otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
122122466
NCBI-ProteinID:
XP_042552593
LinkDB
All DBs
Position
Unknown
AA seq
1998 aa
AA seq
DB search
MALLVHLKTVSELRGRGDRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDKNE
MLEIQIFNYSKVFSNKLIGTFRMVLQKVVEDNHVEVTDTLIDDNNAIIKTSLCVEIRYQA
MDGTVGSWDDGDFLGDESLQEEGKDSQETDGLLPSSHPGSRPPGEKSFRRAGRSVFSAMK
LGKNRAHKEEPQRQDEPAVLEMEDLDHLAIRLGEGLDPDSVSLASVTALTTNVSNKRSKP
DIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEY
FVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILS
DPDDISAGLKGYVKCDVAVVGKGDNIKTPHKANETEEDDIEGNLLLPEGVPAERQWARFY
VKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNE
QVIFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMY
GSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVS
EGCTGKMEEFFLFGAFLEASMIDRKNGDKPVTFEVTIGNYGNEVDGLSRPQRPRPRKEPG
DEEEVDLIQNSSDDEGDDSGDLASVSSTPPMRPQITDRNYFHLPYLERKPCIYIKSWWPD
QRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCHRFLSLADK
DQGHASRTRLDRERLKSCMRELESMGQQAKSLRAQVKRHTVRDKLRLCQNFLQKLRFLAD
EPQHSIPDVFIWMMNNNKRIAYARVPSKDLLFSIVEEELGKDCAKVKTLFLKLPGKRGFG
SAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAAQGLGLHSFPPISLVYTKKQAF
QLRAHMYQARSLFAADSSGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYG
EAHELRDDPPIIVIEIYDQDAMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYR
GNATAGDLLAAFELLQIGPSGKADLPPINGPVDMDRGPIMPVPVGIRPVLSKYRVEVLFW
GLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFSTLVKWFEVDLPENELLHP
PLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDRSAPNWNTTVRLLRGCRVLCNGGPS
SHPTGEVVVSMEPEVPVKKLETMVKLDATSDAVIKVDVAEDEKEKKKKKKKGTSEELEEE
EPDESMLDWWSKYFSSIDTMKEQLRQQEASGTDLEEKEEMDNTEGLKGPVKGKEKARAAK
EEKKKRTQNSGPGQGPETSEQKKPKIDELKVYPKELESEFDNFEDWLHTFNLLRGKTGDD
EDGSTEEERIVGRFKGSLCVYKVPLPEDVAREAGYDPTYGMFQGIPSNDPINVLVRVYVV
RATDLHPADINGKADPYIAIRLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTV
AVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSIHGYNIWRDPMKPSQILTRL
CKEGKVDGPHFGPPGRVKVANRVFTGPSEIEDENGQKKPTEEHVALSALRHWEDIPRVGC
RLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVW
NTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDY
LAAEEKIVISKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAK
TAKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARDENDEFELTGKVEAELHLLTAEEA
EKNPVGLARNEPDPLEKPNRPDTAFVWFLNPLKSIKYLICTRYKWLIIKIVLALLALLML
ALFLYSLPGYMVKKLIGA
NT seq
5997 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcttgtccacctcaagactgtctcggagctgcggggcaggggcgatcggatt
gccaaagtgactttccgagggcagtccttttattcccgggtcctggaaaactgcgaggat
gtggctgacttcgatgagacattccggtggccagtggccagcagcattgacaagaatgag
atgctggagattcagattttcaactacagcaaagtcttcagcaacaagctcatcgggacc
ttccgcatggtgctacagaaggtggtggaggacaaccatgtggaggtgaccgacacactg
atcgatgacaacaatgccatcatcaagaccagcctatgtgtggagatccgctatcaggcc
atggatggcacagtgggctcctgggatgatggagacttcctgggggatgagtctcttcaa
gaggaagggaaggacagtcaagagacagatgggctacttcccagctcccatcctggctct
cggccaccaggcgagaagagcttccggagggccggaaggagtgtgttctccgccatgaag
ctgggcaagaatcgagcccacaaggaggagccccaaagacaagatgagccagcagtactg
gagatggaggaccttgaccacctggccattcggctgggagaggggctggatcctgattca
gtgtccctagcctctgtcaccgctctcaccaccaacgtctccaacaagagatctaagcca
gacatcaagatggagccgagtgctgggcggcccatggactaccaggtcagcatcaccgtg
atcgaggctcggcagctggtgggcttgaacatggaccccgttgtgtgtgtggaggtgggc
gatgacaagaagtacacatccatgaaggaatctaccaactgcccctactacaatgagtac
tttgtcttcgacttccacgtctctcctgacgtcatgttcgacaagatcatcaagatctcg
gtgatccactccaagaatctgctacgcagcggcaccctggtgggctcctttaaaatggat
gtggggaccgtgtactcccagcctgaacaccagttccatcacaagtgggccatcctgtca
gacccggatgacatctccgccgggctgaagggctacgtgaagtgtgatgtcgccgtggtg
ggcaagggagacaacatcaagacaccccacaaggccaatgagacagaggaggatgacatt
gaggggaacttgctgctccctgagggggtgcccgcagagcgtcagtgggcccggttctat
gtgaaaatctaccgtgcggaggggctgccccgaatgaacacaagcctcatggccaacgtg
aagaaagctttcattggcgagaacaaggaccttgtggacccctacgtgcaggtctttttc
gctggccagaagggcaagacctctgtgcagaaaagcagctatgagcccctgtggaatgag
caggtcatcttcacagacctgttcccgcccctctgcaaacgcatgaaggtgcagatccgg
gactctgacaaagtcaatgatgtggccattggcacccacttcattgacctgcgaaagatt
tccaatgatggagacaaaggcttcctgcccaccctgggccctgcctgggtgaacatgtac
ggctccacacgcaactatacactgctggatgagcaccaggacctgaatgagggcctggga
gaaggagtgtccttccgcgcccgcctcatgctgggcctggctgtggagattctggacacc
tccaaccctgaactcaccagctccacagaggtgcaggtggagcaggccacgcctgtctca
gagggctgcacagggaagatggaagaattctttctatttggagccttcttagaggcctcc
atgatcgaccggaaaaatggagacaagccagtcacctttgaggtgaccataggtaactat
gggaatgaagtggatggcctctcaagaccccagcggcctcggccccggaaggagcccggg
gatgaggaagaagtggacctgatccagaactccagtgatgatgagggtgatgacagcggg
gacctggcctcggtgtcctccacaccccccatgagaccccagatcactgacaggaactac
ttccacctaccctacctggagcgcaagccctgcatctacatcaagagctggtggcctgac
cagcgccgccgcctttacaatgccaacatcatggaccacatcgctgacaagctggaagaa
ggcctgaatgatgtgcaggaaatgatcaaaacggagaagtcctaccccgagcgccgcctg
cggggtgtgctggaggagctcagctgtggctgccaccgcttcctctccctcgccgacaag
gaccagggccacgcatcccgcaccaggctggaccgggagcgcctcaagtcctgcatgagg
gagctggaaagcatggggcagcaggctaaaagcctgcgtgctcaggtgaagcggcacacg
gtgcgggacaagctgaggctgtgccagaatttcctgcagaagctgcgcttcctggcagat
gagccccagcacagcatcccagacgtcttcatctggatgatgaataacaacaagcgaatc
gcctatgcccgggtgccttccaaagatttgctcttctccatcgtggaggaggagctgggc
aaggactgtgccaaggtcaagaccctctttctcaagctgccagggaagcggggcttcggc
tcagcaggttggacggtgcaggctaagctggagctctacctgtggctgggcctcagtaag
cagcgaaaggacttcctgtgtggcctgccctgcggctttgaggaagtcaaggcggctcag
ggcctgggcctgcactccttcccacccatcagcctggtctacaccaagaagcaggccttc
cagctccgagcccacatgtaccaggcccgcagcctctttgctgctgacagcagtggcctc
tccgaccccttcgccagggtcttctttatcaatcagagccagtgcacagaggtgctgaat
gagacactgtgtcctacttgggaccagatgttagtgtttgacaacctggagctgtatggc
gaggctcacgaattgcgggatgaccctcccatcattgtcattgaaatctatgaccaggat
gccatgggcaaagcggatttcatgggtcggactttcgccaagccgttggtgaagatggcg
gacgaagcgtactgcccaccccgcttcccaccccagctggaatactatcagatctaccgt
ggcaatgccacagctggggacctgttggctgcctttgagcttctgcagattggaccatca
gggaaagctgacctacctcccatcaatggcccagtggacatggaccgagggcccatcatg
cccgtgcctgtgggcatccggcctgtgctcagcaaataccgtgtggaggtgctgttctgg
gggctgcgggatctgaagcgagtcaacctggctcaggtggaccggccacgggtggacatt
gagtgtgcagggaagggggtacagtcatcgctgatccacaactacaagaagaaccccaac
ttcagcaccctggtcaagtggtttgaagtggacctcccagagaatgagctactgcaccca
cctttaaacatccgtgtggtggactgcagggcctttggccgctacacgctggtgggctct
cacgccgtcagctctctgcggcgcttcatctaccggcccccagatcgctcagctcccaac
tggaacaccacggtcaggcttctccggggctgccgtgtgctgtgcaatgggggcccctcc
tctcaccccacaggggaggttgtggtgagcatggaacccgaggtacctgttaagaagctg
gagaccatggtgaagctggatgcgacttcagatgctgtcatcaaggtggatgtggctgag
gatgaaaaggagaagaagaagaaaaaaaagaagggtacctcggaagagctggaggaggag
gagccagatgagagcatgctggactggtggtccaagtacttctcctccatcgacactatg
aaggagcaacttcggcaacaagaggcctccgggactgacttggaagagaaggaggaaatg
gacaacactgaaggcctgaaggggccagtgaagggcaaagagaaggccagggctgccaaa
gaggagaagaagaagagaactcagaactctggccccggccaaggaccggagacctctgag
cagaagaaacccaaaattgatgagcttaaggtgtaccccaaggaactagagtccgagttt
gacaactttgaggactggctgcacaccttcaacctgctccgaggcaagacaggggatgat
gaagacggctccactgaggaggaacggatcgtgggcaggttcaagggttccctctgcgtg
tacaaagtgccgctcccagaggacgtggcccgggaagccggctatgacccgacctacggc
atgttccagggcatcccaagcaatgaccctatcaacgtgctagtccgagtctatgtggtc
cgggccaccgacctacacccagctgacatcaatggcaaagctgacccatacatcgccatc
cggctaggcaagaccgacatccgggacaaagagaactacatctccaagcagctcaacccg
gtgtttgggaagtcctttgacatcgaggcctcttttcccatggaatccatgctgaccgtg
gctgtgtatgactgggatctggtgggcaccgacgacctcattggagaaaccaagattgac
ctggagaaccgcttctacagcaagcaccgggccacctgcggcatcgcccagacctactcc
atacatggctacaatatctggagggaccccatgaagcccagccagatcctgacccgcctc
tgcaaagaaggcaaggtagatggcccccacttcgggcctcctggaagagtgaaggtggcc
aaccgtgtcttcactgggccctcggagatcgaggatgagaatggacagaagaagcccaca
gaggagcacgtggctctgtctgccctgaggcactgggaagacattccccgagtgggctgc
cgtctggtgccggaacacgtcgaaaccaggccactgctcaaccctgataaaccaggcatt
gagcagggccgcctggagctatgggtggacatgtttcccatggacatgccagcccctggg
acacctctggacatctcccccaggaagcccaagaagtacgagctgcgggtcatcgtgtgg
aacacagacgaggtggtcctagaggatgacgatttcttcactggggagaaatccagtgac
atctttgtgcgagggtggctaaagggtcagcaggaggacaaacaggacacagatgtccac
taccactccctcaccggtgagggcaacttcaactggcgctacctgttcccctttgactac
ctggcggcagaggagaagatcgtgatctctaagaaggagtccatgttctcctgggatgag
acagagtacaagatccctgctcggctcaccctccagatctgggatgctgaccacttctcc
gctgatgacttcctgggggccatcgagctggacctgaaccggttcccacgaggtgcaaag
acagccaagcagtgcaccatggagatggccacgggggaagtggacgtgcccctggtttcc
atcttcaagcagaagcgcgtcaaaggctggtggcccctcctggcccgcgatgagaatgac
gagtttgagctcacgggcaaagtagaggctgagctgcatttactgacagcagaggaggcg
gagaagaatccagtaggactggcccgaaatgagcctgaccccttagagaaacccaatcgg
cctgacacagcctttgtctggttcctaaaccctctcaagtccatcaagtacctcatctgc
acccggtacaagtggctcatcatcaagatcgtgctggcgctgctggcactgctcatgctg
gccctcttcctctacagcctccccggctacatggttaagaagctcattggggcgtga
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