Dipodomys spectabilis (banner-tailed kangaroo rat): 122122592
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Entry
122122592 CDS
T07891
Symbol
Traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04064
NF-kappa B signaling pathway
dsp04620
Toll-like receptor signaling pathway
dsp04621
NOD-like receptor signaling pathway
dsp04622
RIG-I-like receptor signaling pathway
dsp04657
IL-17 signaling pathway
dsp04668
TNF signaling pathway
dsp04936
Alcoholic liver disease
dsp05160
Hepatitis C
dsp05161
Hepatitis B
dsp05162
Measles
dsp05164
Influenza A
dsp05165
Human papillomavirus infection
dsp05167
Kaposi sarcoma-associated herpesvirus infection
dsp05168
Herpes simplex virus 1 infection
dsp05169
Epstein-Barr virus infection
dsp05171
Coronavirus disease - COVID-19
dsp05200
Pathways in cancer
dsp05203
Viral carcinogenesis
dsp05222
Small cell lung cancer
dsp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
122122592 (Traf3)
04668 TNF signaling pathway
122122592 (Traf3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122122592 (Traf3)
04621 NOD-like receptor signaling pathway
122122592 (Traf3)
04622 RIG-I-like receptor signaling pathway
122122592 (Traf3)
04657 IL-17 signaling pathway
122122592 (Traf3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122122592 (Traf3)
05203 Viral carcinogenesis
122122592 (Traf3)
09162 Cancer: specific types
05222 Small cell lung cancer
122122592 (Traf3)
09172 Infectious disease: viral
05161 Hepatitis B
122122592 (Traf3)
05160 Hepatitis C
122122592 (Traf3)
05171 Coronavirus disease - COVID-19
122122592 (Traf3)
05164 Influenza A
122122592 (Traf3)
05162 Measles
122122592 (Traf3)
05168 Herpes simplex virus 1 infection
122122592 (Traf3)
05167 Kaposi sarcoma-associated herpesvirus infection
122122592 (Traf3)
05169 Epstein-Barr virus infection
122122592 (Traf3)
05165 Human papillomavirus infection
122122592 (Traf3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
122122592 (Traf3)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
122122592 (Traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
zf-C3HC4_2
MPS2
Spc29
ATG16
zf-RING_UBOX
zf-RING_5
KxDL
Crescentin
FliJ
GAS
DUF3450
zf-RING_6
DUF1664
T3SSipB
LMBR1
BLOC1_2
THOC7
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
122122592
NCBI-ProteinID:
XP_042552793
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MESSKKMDSAGALHPNPPLKLQSDRGTGAVFVPDQGGYKEKFVKTVEDKYKCEKCRLVLC
NPKQTECGHRFCESCMATLLSSSAPKCTACQESIVKDKVFKDNCCKREILALQIYCRNES
RGCAEQLMLGHLLVHLKNECQFEELPCVRAACKEKVQRKDLRDHVEKACKYREATCNHCK
SQVPMITLQKHEDTECPCVVVSCPHKCSVQTLLRSELSAHLSECVNAPSTCSFKRYGCVF
QGTNQQIKAHEASSAVQHVNLLKEWSSSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgagtaaaaagatggactctgctggcgccctgcaccccaacccaccactaaag
ctgcagtcggaccgtggcaccggggctgtgtttgtcccggaccagggaggctacaaggag
aagtttgtgaagacagtggaggacaagtacaaatgtgagaagtgccgcctggtgctgtgc
aaccccaagcagactgagtgtggacaccggttctgtgagagctgcatggccaccctgctc
agctcctctgctccaaaatgtactgcgtgtcaagaaagcatcgttaaagacaaggtgttt
aaggataactgctgcaagagagaaattctggcccttcagatctattgtcggaatgaaagc
agaggttgtgcagagcagttaatgctgggacatctgctggtgcacctaaaaaatgagtgc
cagtttgaggagcttccctgtgtgcgtgcagcctgcaaagaaaaagtacagaggaaggac
ctgcgtgatcacgtggagaaggcctgtaaataccgagaggccacgtgtaatcactgcaag
agccaagtcccgatgatcacgctgcagaaacacgaagacacggagtgtccttgtgtggta
gtgtcctgccctcacaaatgcagcgtgcagaccctgctgaggagcgagttgagtgcacac
ttgtcagagtgtgtcaatgcccccagcacgtgtagttttaagcgctatggctgcgttttt
caggggacgaaccagcagatcaaggcgcacgaggccagctctgcagtgcagcatgtcaac
ctgctgaaggagtggagcagctccctggagaagaaggtttccttgttgcagaatgaaagt
gtagaaaaaaacaagagcatacaaagtttgcacaatcaaatatgtagctttgaaattgaa
atcgagagacaaaaggaaatgttgcgaaataatgaatccaaaatacttcatttacagcga
gtaatagacagccaagcggagaaactgaaagagctcgacaaggagatccgacccttccgt
cagaactgggaggaagcagacagcatgaagagcagtgtggagtctctccagaaccgtgtg
accgagctggagagtgtggacaaaagtgcggggcaggcggcgcgaaacacaggcttgctg
gagtcccagctgagcaggcatgaccagatgctgagtgttcatgacatccgcctggccgac
atggaccttcggttccaggtgctggagaccgccagctacaacggcgtgctgatctggaag
atccgggattataagcgccggaagcaggaggccgtcatggggaagaccctgtctctctac
agccagcccttctacactggctactttggctataagatgtgtgcccgggtctacctgaac
ggggatgggatggggaaagggacacatctgtcactcttctttgtcatcatgcgtggagaa
tatgatgctttgctaccgtggccatttaagcagaaagtgacgctcatgttgatggatcag
ggctcctcccggcgtcacctgggtgatgcgttcaaacccgaccccaacagcagcagcttc
aagaagcccaccggagagatgaacatcgcctccggctgccccgtctttgtggcccaaact
gttctagaaaacgggacgtatattaaagatgatacaatttttattaaagtcatagtggat
acttcggacctgcctgacccctga
DBGET
integrated database retrieval system
