Dipodomys spectabilis (banner-tailed kangaroo rat): 122123005
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Entry
122123005 CDS
T07891
Symbol
Pml
Name
(RefSeq) protein PML isoform X1
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04120
Ubiquitin mediated proteolysis
dsp04144
Endocytosis
dsp05164
Influenza A
dsp05168
Herpes simplex virus 1 infection
dsp05200
Pathways in cancer
dsp05202
Transcriptional misregulation in cancer
dsp05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122123005 (Pml)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122123005 (Pml)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122123005 (Pml)
05202 Transcriptional misregulation in cancer
122123005 (Pml)
09162 Cancer: specific types
05221 Acute myeloid leukemia
122123005 (Pml)
09172 Infectious disease: viral
05164 Influenza A
122123005 (Pml)
05168 Herpes simplex virus 1 infection
122123005 (Pml)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122123005 (Pml)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122123005 (Pml)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3583
zf-B_box
zf-C3HC4
VPS13_mid_rpt
DUF1688
Motif
Other DBs
NCBI-GeneID:
122123005
NCBI-ProteinID:
XP_042553421
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MLKSPPPAWSPDREPEPDPQPEPPAGPHPGASPGGPQPSPSPAEPTMEEEFRFLLCQGCH
TLAKCPKLLTCLHTLCSGCLEAHGLQCPTCQESQPRDPKEEALDNVFFESLQRRLSLYQQ
IVEAQALCTRCKEPAVFWCFECEQLLCAKCFEAHQWFLKHEARPLTELRDQTAREFLDGT
RKTNNIFCSNPNHRTPALTSIYCRGCSKPLCCSCALLDAGHSDLKCDLGAEVRQRQEELR
ATAQALQEREHTFADAHAQVRAALSQLGCARADTEELIRASVRQAVARVQAREHALLEAL
EARFQLERTKLADQLQRLDTVLQRMRTGGALVQRLELYASDQEVLDMHSFLQGALDRLRQ
EEPEGPGAPRDPAEPRSFAEIEVQLQDLVSCITNAVLTREASPEASSMPQNSLDVELPRE
EQRTETQSLSQAETQLVAMEQSEPSAPPVPRYNFCMTGPSFREEGSGINPPKKRKSCYTQ
CPKIIKMESEDEKEARLSASSPEYPIPSTSRAVPHPHLGADGPPSPERPRLGQEILLPQS
NHVTSDDPEPGEPVVVISSSDDSEPENLSSHELDGSSEAQLEGPSTIHTLDSLHAEPQVE
DRPLIFFDLKIDDKTQKISQLAAVNQDTKFRVLIQPQGVFSVHTKAVSLEAGLLHFLRFL
CSMQRPILACYTLWGPALPCFFQALEDMSQLWEFQQAISGFLAVLPLIEERVPGAGSFKL
KKLAKTYLARNLSDRSALAAVLAMRDLCRLLEISPGPQLIPHVYPFSNLQCFASLQPLLQ
AGVLPTADARLLALSNVSFQELLIAHRYNPKGGLKRYGRYLNPQASPASPDPPSPSLHAL
NLYLDGLVERAALAPEEGISAPLNVSQWS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtcgccgccacccgcctggtccccggaccgggagcccgagcccgatccccag
cccgagccgcccgccgggcctcaccccggggcctcgcccggaggcccccagcccagcccc
agccccgcggagccaaccatggaggaggagttccggttcctgctctgccagggctgccac
accctagccaagtgcccgaagctgttgacttgtttgcacacgctgtgttccggctgcctg
gaggcccacggtctgcagtgtcccacctgccaggagtcccaaccccgggacccgaaggag
gaggccctggataacgtgttcttcgagagcctgcagcggcgtctgagcctgtaccagcag
atcgtggaagcacaggccctgtgcacacgctgcaaagagccggccgtcttctggtgcttc
gagtgcgaacagctgctctgcgccaagtgtttcgaggcccaccagtggtttctaaagcac
gaggcccggcccctgacggagctccgcgaccagacagcccgcgagttcctagacggcacc
cgcaagaccaacaacatcttctgctccaaccccaaccaccgcaccccagcgctgaccagc
atctactgccggggctgcagcaagccgctgtgctgctcgtgcgcgctcctggacgccggc
cacagcgacctcaaatgcgacctgggcgccgaagtccggcagcgccaggaggagctgcga
gccacggcgcaggcgctgcaggagcgggagcacaccttcgctgacgcgcatgcgcaggtg
cgcgcggcgctgagccagctgggctgcgcacgcgccgacacggaggagctgatccgcgca
agcgtgcgccaggctgtggcgcgcgtgcaggcgcgggagcatgcgctgctcgaggccctg
gaggcgcgcttccagctggagcgcacaaaactggcagaccagctccagcgcctggacacc
gtgctgcagcgcatgcgcacgggcggcgcgctggtgcagcgcctggagctgtacgcctcg
gaccaggaggtgctggacatgcacagcttcctgcagggcgcgctcgaccgcctgcgccaa
gaggagccagaaggccccggggcgccgcgggacccggcggagccccgcagcttcgcagag
atcgaggtgcagctgcaggatctcgtctcttgcatcactaatgctgtgctgaccagggaa
gccagcccagaggcctccagcatgcctcagaattctctggatgtggagctgcccagagag
gagcagaggacagaaacccagtccctcagccaggctgagacccagcttgtggctatggag
cagtcagagcccagcgctcccccagtacccagatacaacttctgcatgacaggcccatcc
ttcagggaggaaggttccggaataaacccccccaagaagaggaagtcctgctatacccag
tgccccaaaatcatcaagatggaatccgaggatgagaaggaggcaaggctgtccgcgagc
tccccagaataccccatacccagcacctccagagcagtgccacatccccacctaggtgcg
gacggcccccccagcccggagaggcctcgcctaggacaagagatccttctgccccaaagc
aatcatgtgaccagcgacgatccagagccaggcgagcctgtcgtggtcatcagcagctcg
gacgactctgagcctgagaacctgtcctcccacgagctagatggcagcagcgaggcccag
ctggaggggcccagcaccatccacaccctggacagcctccacgctgagccccaggtggaa
gacaggcccctgattttctttgacctgaagattgacgacaaaacccagaagattagccag
ctggccgcagtgaaccaggacaccaagttccgcgtgctcatccagccgcagggcgtgttc
agcgtgcacacgaaggccgtgtctttggaggccggcctcctccacttcctccgcttcctc
tgctccatgcagcgccccatcttggcctgctacacactgtgggggcctgccctgccctgc
ttcttccaggccctggaggacatgagccagctgtgggagttccagcaggccatctccggc
ttcctggccgttttgcccctcatcgaggaacgcgtgcccggcgccggcagcttcaagctc
aagaaactagccaagacctacctggccaggaacttgagcgatcgcagcgccctggctgcc
gtgctggccatgcgagacctgtgccgcctgctggaaatctcgcccggcccgcagctgatc
cctcacgtctaccccttcagtaacctgcagtgctttgcctccctgcagcccctgctgcag
gcgggggtcctgcccacggccgacgcccgtctcctggccctctccaacgtcagcttccag
gagctgctgattgcccaccgttacaatcccaaggggggcctgaagaggtatggccgctac
ctgaacccccaggcctccccggcctcccccgacccgccttctccctccctgcacgcgctc
aacctttacctggatggcctggtggagcgggcagccctggcaccggaagagggcatctct
gcgcctctcaatgtctcccagtggagttga
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