Dichomitus squalens: DICSQDRAFT_136248
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Entry
DICSQDRAFT_136248 CDS
T03133
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
dsq
Dichomitus squalens
Pathway
dsq03420
Nucleotide excision repair
dsq04111
Cell cycle - yeast
dsq04120
Ubiquitin mediated proteolysis
dsq04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DICSQDRAFT_136248
04120 Ubiquitin mediated proteolysis
DICSQDRAFT_136248
09124 Replication and repair
03420 Nucleotide excision repair
DICSQDRAFT_136248
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
DICSQDRAFT_136248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsq04121
]
DICSQDRAFT_136248
03400 DNA repair and recombination proteins [BR:
dsq03400
]
DICSQDRAFT_136248
Enzymes [BR:
dsq01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
DICSQDRAFT_136248
Ubiquitin system [BR:
dsq04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
DICSQDRAFT_136248
Multi subunit type E3
SCF complex
Ring finger protein
DICSQDRAFT_136248
Cul2 complex
DICSQDRAFT_136248
Cul3 complex
DICSQDRAFT_136248
Cul4 complex
DICSQDRAFT_136248
Cul7 complex
DICSQDRAFT_136248
Cul8 complex
DICSQDRAFT_136248
Cul9 complex
DICSQDRAFT_136248
DNA repair and recombination proteins [BR:
dsq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
DICSQDRAFT_136248
TCR (transcription coupled repair) factors
Cul4-CSA complex
DICSQDRAFT_136248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
18835441
NCBI-ProteinID:
XP_007365421
JGI:
136248
UniProt:
R7T188
LinkDB
All DBs
Position
Unknown
AA seq
118 aa
AA seq
DB search
MADTMDVDVDPPTTAEPKGKTKEDAKGDKKRFEVKKWNAVALWAWDIVVENCAICRNHIM
DLCIDCQANQVSATSEECNAAWGICNHAFHFHCISRWLKTRNVCPLDNREWELQKYGR
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacgatggatgtcgatgtggatcctccgactaccgctgagcccaagggtaag
accaaggaggacgccaagggcgacaagaagcgctttgaagtcaagaagtggaacgccgtg
gccctttgggcatgggacattgtcgtcgagaactgcgcaatctgcaggaatcacatcatg
gatctctgcatcgattgccaggcgaaccaggtctccgccacttccgaggaatgtaacgcc
gcctggggtatctgcaaccatgcattccacttccattgcatctcgcggtggctcaagacg
cgtaacgtatgccccctggacaaccgagagtgggagttgcagaagtatggtcgctaa
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