Dichomitus squalens: DICSQDRAFT_76557
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Entry
DICSQDRAFT_76557 CDS
T03133
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dsq
Dichomitus squalens
Pathway
dsq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dsq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DICSQDRAFT_76557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dsq03041
]
DICSQDRAFT_76557
Spliceosome [BR:
dsq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
DICSQDRAFT_76557
Complex C
U5 SnRNP specific factors
DICSQDRAFT_76557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
SRPRB
Motif
Other DBs
NCBI-GeneID:
18844120
NCBI-ProteinID:
XP_007360556
JGI:
76557
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MASFEDYDEFGNYIGADLESDEEEEEQNQFVPQPQVQPLEGFEEEPAANDEMALMEVDEP
VHNAVVLHEDKQYYPSASQVYGEEVETLVQEEDAQPLTEPIVAPVKVRKWTVEEKDMPET
RFDKGFLLNMMALPEFVRNVAVVGHLHHGKTALMDMLVFETHKLTWDSDHPTRYTDTHIL
SRDRAISIKSCPMSLILQNSYGKSHLVHLIDTPGHVNFVDEVASAIRLVDGILLVVDVVE
GVMCNTEAIIRHALQEGVKITLVVNKIDRLILELRIKPADAYYKIKHTIEEVNTFISGIN
PDPDLRLSPENGNVAFASTDMHWCFTLRSFAQMYADTYGSVDVNAFADRLWGDIYYNREN
RKFTRKPADPETNRSFVHFILEPLYKLYSQVLSEETEPLKETLASLGIQLKPIMYKMDVR
PLLKVILDQFFGPSVGLVDVISEHIPSPLEATRTKVERTYLGPMSSELAQTMQECNPEGP
VMVQIAKLHHTTDAQTFRAFGRVISGTVRKGMDVKVLGEGYSPEDEEDMAKAVVEDIWIS
EARYFIPAEEAPAGNLVLLGGVDASIFKTATIAGVDIEDDLHIFRPVKHMTQSVLKIAIE
PIAPSELPKMLSGLRSINKSYPLVTTKVEESGEHVVIGTGELYLDCVMHDLRRLFSEIEI
KVSDPVTKFAETVLETSALKCYADTPNKKNRLTMIAEPLERGIAEDIETGRVNMRMTAKE
RGKFFEEKYQWDLLASRSIWAFGPDDSGPNILLDDTLPSQVDKKLLGTVKEHIKQGFQWG
TREGPLCDEPMRNVKFRILDASLAQEPIYRGGGQIVPTARRVCYSSFLMATPRLMEPIYY
VEVQAPADCISAVYTVLARRRGHVTQDIPKAGSPLYTVKALIPVIDANGFETDLRTATQG
QAFCLQVFDHWSIVPGDPTDTSIKLRPLEPASGQALARDLVLKTRRRKGLGDQISVSKYL
DDEFILALSASGHADLLG
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcctccttcgaagattacgatgaatttggaaactacattggtgctgatcttgagtca
gacgaggaagaagaggagcagaaccagttcgtgccccagccacaggttcagcctttggag
ggtttcgaagaggagcccgctgcgaatgatgagatggccctcatggaagtagacgagccc
gtacataacgcagttgtattgcatgaagacaagcagtactatccgtctgcgtcccaagtg
tacggagaggaggtcgagacgctagttcaggaggaggacgcgcaaccccttacggaaccc
attgttgctccagtgaaggtgcggaaatggactgtggaggaaaaggacatgccggagacg
cggttcgacaagggcttcttgttgaacatgatggcacttcctgagttcgtacgaaacgtc
gcggtcgtcgggcaccttcatcacggcaaaacagccctcatggacatgctcgtcttcgaa
actcacaagctgacatgggattctgaccacccgacccgttacactgacacccacatcctg
tcccgcgaccgcgcgatctccataaagtcttgtcccatgtccctaattctccagaacagc
tatggaaaatcgcacctcgtccatctgatcgacactcctggccacgtcaactttgttgat
gaggtagccagcgccattcggttggtagatggtatcctccttgtggtcgacgtcgtggag
ggggtgatgtgcaacacagaggcgatcatccgccacgcgctccaagaaggtgtcaaaatc
actcttgttgtaaacaagattgaccgactgattcttgagctgcgcatcaagccggctgac
gcctactataaaatcaagcatactattgaggaggtcaacacattcatcagtggcatcaac
cccgatccagatttgagactcagcccagaaaatggtaacgtcgcgttcgcgagcactgat
atgcattggtgcttcaccctgcgttccttcgcgcaaatgtatgcggatacttacggctct
gtggacgtcaatgctttcgctgaccgactatggggcgatatctactacaatcgcgagaac
cggaaattcacgcggaaacccgcagatccagagaccaatcgctccttcgtgcatttcatc
ctcgagccgctatacaagctctacagccaagtgctcagcgaggaaactgaacccctcaag
gagactctggcgagcctgggcatccagcttaagccgatcatgtataagatggacgtgcgg
cctctgctgaaggttatcctcgaccagttcttcggcccatccgttgggctggtagatgtg
atatctgagcacatcccatcaccattggaggcgactcgtaccaaggtcgagaggacgtat
ctaggacccatgtcgtcggagctcgcgcagaccatgcaggagtgcaatccggagggaccc
gtcatggtacagatcgccaagctacaccacaccactgacgcgcagaccttccgcgccttt
ggtcgtgtcatcagcgggactgttaggaagggcatggacgtcaaggtgctcggagagggc
tactcaccagaggacgaggaagacatggccaaggctgtcgttgaggacatctggatcagc
gaagcccggtatttcattcccgcagaggaagcaccagcagggaacctggttttgctcggt
ggcgttgacgcgtccatcttcaagacggcaacgatagctggcgtcgacattgaagacgac
ctgcacatcttccgtccggtcaagcacatgacgcagtcggtgctcaagattgctattgaa
cccatcgctccctctgagctgccgaagatgctctctggtctccgaagtatcaataaatcg
tatcctctcgttacgaccaaagtcgaggagagtggcgagcacgtcgtgattggcacgggc
gaattgtatctcgactgcgtcatgcatgatctgaggagactcttctccgagatcgagatc
aaagtgtcggatccggttacgaagtttgcggagacagtgctcgagacaagtgcactcaag
tgttatgccgatacgcccaacaaaaagaaccgtctcacaatgattgcggagccgctggag
cgtggaattgcggaggacatcgagactgggcgagtgaacatgcgcatgacggcgaaggag
cgcggcaagttcttcgaggagaagtaccagtgggacctgctcgcttcacggtcaatatgg
gcgttcggcccagacgacagcgggccaaacatcttgctcgacgacacgcttccatcgcag
gtggacaagaagcttctcggcactgtcaaggagcacatcaagcagggcttccagtggggt
acccgtgaagggcctctgtgcgatgaaccgatgcgcaatgtcaagttccgaatactcgat
gctagcttagcgcaggagccaatttaccgtggtggaggtcagatcgtcccgactgcccgt
cgcgtctgctactcttcattcttgatggcaactccccggttgatggagcctatatactat
gtggaggtgcaggctcccgctgactgtatatctgcggtgtacactgtgcttgcgcgacgc
cgcggtcacgttactcaggatatccccaaggctgggtcgcctctctacaccgtcaaggcc
ctcatccccgtcatcgacgcgaacggctttgagacagacctgcgcacagcaacacagggt
caggcgttctgcctgcaggtgttcgaccactggtctatagtgccgggtgatcctactgac
acgagtatcaagctccgcccactggagccggcgtccggacaggcactcgcacgggacctt
gtgttgaagacgaggcgacggaagggcctgggagaccagatctcagtttcgaagtacttg
gacgacgaattcatccttgcgctatcggcgtcggggcacgcagacctgctcgggtag
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