Dermacentor silvarum: 119452482
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Entry
119452482 CDS
T07348
Name
(RefSeq) TNF receptor-associated factor 6-B
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv04120
Ubiquitin mediated proteolysis
dsv04140
Autophagy - animal
dsv04144
Endocytosis
dsv04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119452482
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119452482
04140 Autophagy - animal
119452482
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119452482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsv04131
]
119452482
04121 Ubiquitin system [BR:
dsv04121
]
119452482
Enzymes [BR:
dsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119452482
Membrane trafficking [BR:
dsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119452482
Ubiquitin system [BR:
dsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119452482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
CEP104_ZnF
zf-C3HC4_2
PMC2NT
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
119452482
NCBI-ProteinID:
XP_037570531
LinkDB
All DBs
Position
5:85442969..85457482
Genome browser
AA seq
507 aa
AA seq
DB search
MTISPEQSALSTTASANDKGALPLRLNISGHSSQRIGCNTAMLPGSPQYTLVGFSDVLDW
KPLLFVKPIPPNRVCALCGLIRPVSVLLLCGHVFCDCCSEQGVVDDDHHCPLDGGRCTKD
DVEWRRFPAANLLQRDVYCWNKRSGCAAVMPASDVYKHFLNECTHHSTFCTRCSNAVLYS
SIYAHVISHCRTLAISSAPENPQGSIQRDQTTTTGATTQCAEKCAAEINVALHSILSESN
AQSNALNDLSQKMNIVINVVTEESRVVATRTNECLERNAAQFSGINESVEQCLAASNSCL
EQISGMLAVLKNTMSKVELAAQREHGVVAKAAAQIGAMQMEVNESSQEILRVTERMLAHS
SILLNFYTFNVQGVSALKRDALDEGETTFECDKVYLRGYYMSPGVCLRKQNDSLSLHIVI
FLHKGVLDDFVEWPFHNTVQLSVIHPISGLRREICCKFSKENLPFLQKPVESSNSEVFSK
QASLSLSDLEQDGYVLDDKLQCRWDIL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacgatatcgccagagcagagtgctctttcgactacagccagtgcaaatgataaaggt
gctcttccactgcggctgaacatttcggggcacagttcacagcggatcggctgtaacaca
gcgatgcttcctggcagcccgcagtacacgctcgtcgggttctccgacgtactcgactgg
aagcccttgcttttcgtgaagccgataccgccgaacagagtgtgcgccttgtgcgggctc
atacgaccagtgagcgtgctgctactgtgtggacacgtattctgtgactgctgcagcgaa
cagggcgtggtggacgacgaccaccactgcccactagacggtggccgctgtacgaaggac
gacgtcgaatggaggcgatttcctgccgccaacctgctgcagagagatgtatactgctgg
aacaagcgatctggatgtgcagccgtcatgcctgcgtctgatgtctacaagcattttctg
aatgaatgcacgcaccactcgaccttttgtacaagatgttctaatgctgttttgtacagc
agtatttacgcgcacgtcatatcacactgtaggactctggccatatccagtgctccagag
aaccctcaaggatcgattcagagagaccaaacgacaacgacgggagcgaccacacaatgt
gccgaaaaatgtgcggctgaaataaacgttgctttgcacagcattctgagcgaaagcaac
gcacaaagcaacgcacttaacgatctgtctcaaaaaatgaacattgtcataaacgttgtg
acagaggaatcccgagtggtagctacacgaactaatgaatgtctagaaagaaatgctgct
cagttcagcgggatcaacgaatcagtagaacaatgtttggcggcttcgaacagttgtcta
gagcaaatttctggaatgcttgccgtcctaaagaacacgatgagcaaagtggaactcgca
gcccaacgcgagcatggtgtggtggctaaagcagcggctcaaattggcgcaatgcaaatg
gaagttaatgagagtagtcaagaaatattgcgcgtaacagaaaggatgctggcgcatagc
tcaatcttgcttaatttctacacttttaatgtacaaggagtaagcgcactaaaacgagat
gctctggatgaaggcgagactacgtttgaatgcgataaggtgtatctgcgcggctactac
atgtcaccaggagtgtgccttaggaagcaaaacgactcgctttcactacatattgtgatt
tttcttcacaaaggcgtactcgatgactttgtcgagtggcccttccataatacggtccag
ctcagcgtaatacatccaatttccggtcttaggcgcgaaatttgctgcaagttttctaaa
gaaaacttaccctttctacagaaaccagttgaatctagcaacagcgaagttttttcaaaa
caagcgtcgctctccttgagtgatctggagcaagacggctacgtgctggacgacaagcta
cagtgccgatgggacattctctga
DBGET
integrated database retrieval system
