Dermacentor silvarum: 119465198
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Entry
119465198 CDS
T07348
Name
(RefSeq) TNF receptor-associated factor 6-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv04120
Ubiquitin mediated proteolysis
dsv04140
Autophagy - animal
dsv04144
Endocytosis
dsv04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119465198
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119465198
04140 Autophagy - animal
119465198
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
119465198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsv04131
]
119465198
04121 Ubiquitin system [BR:
dsv04121
]
119465198
Enzymes [BR:
dsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119465198
Membrane trafficking [BR:
dsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119465198
Ubiquitin system [BR:
dsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119465198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-C3HC4_3
MATH_2
zf-C3HC4
zf-RING_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
119465198
NCBI-ProteinID:
XP_037581924
LinkDB
All DBs
Position
9:complement(31144598..31348986)
Genome browser
AA seq
514 aa
AA seq
DB search
MASRGQRYTLCGFSQELDWRPLHFVERIPENKICNACGVLPSITAFLPCKHVLCRSCYEH
CRLDNSHACPLDGDQFLAEDAEWINFPLDNLLRRKVKCWNAEQGCGMVLVASEQIKHFCE
DCDYHFSSCPNCSKVVLRRDVCAHLQSKCRDYALSAASRSPHRTDSESKAMIMALNASMD
MQEGEMKDRLDQVISDNSGQSDRLNEISHFMNSIKEILLQISSKALENVASQAPATISRR
EAIQQTLIEHSKKLQELAQTTSNSNKAQMKALEDTKHAVEQLKGNTANMLQAELRQRSVA
DCAALRKVSDRLETFEKLLEDSTKAICRNISESAARIGEGNDGAEQSWSSATKLKELALN
TINIRRYEFFVKGLKAMKYSTHSTGYHIYKCENMYMSGYHLSPGVHLKKVGEHVLLCARM
QLHKGVIDEFLPWPFNEKIQLTVKHPSRQKHYQLIEETGDLLGSYGRPQQSSNSGVCFMA
SSVRLDDLKREGYVADDNLQIVWELVPKDLPKQY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcgaggccagcggtatacgctgtgcggtttttctcaggaactagactggcga
cctttgcacttcgtcgagcgtattcctgaaaacaaaatatgcaacgcgtgtggtgtgctg
cccagtattactgcctttctgccatgcaaacacgtgctctgccgcagctgctacgagcac
tgccggctcgacaattcacacgcctgtccgctcgacggtgaccagtttcttgccgaagac
gctgagtggataaactttcccttggacaacctgctcaggcgcaaggtaaaatgctggaat
gccgaacaaggctgcggcatggttttggtggcatcagaacaaatcaaacatttttgcgaa
gactgtgactaccacttttcgtcgtgtcccaattgttcaaaggttgtgctccgtagagat
gtgtgcgcgcatctccagagcaaatgcagagattatgcgctgtctgcggcgtcccggtcc
ccacataggaccgatagtgagagcaaggcaatgatcatggctctgaatgcaagcatggac
atgcaagaaggtgaaatgaaagacaggctagaccaggttattagtgataatagcggccaa
agtgaccgcctcaacgaaatttcacatttcatgaactcgatcaaagaaattctgctacag
atatcgagtaaagcacttgagaacgttgcatcgcaagcaccagctaccatatcccgccgt
gaagcaatccagcaaactttgattgaacacagtaaaaagctgcaggagcttgcacaaact
acaagcaattcaaacaaagcacagatgaaagctttagaagacacgaagcacgctgtagaa
caactgaaaggaaatacagctaacatgttgcaagcagaattacggcaacgttcggtggct
gactgcgctgcactcaggaaagtttccgacaggctggagaccttcgaaaaactgttggag
gactccactaaggcaatctgtagaaatatatcagaaagtgctgctaggattggtgaagga
aatgatggtgcggagcaaagttggtcgagtgcaacaaaactaaaagaactggccctaaat
actatcaatattaggcgatacgagttttttgtaaagggattgaaagcaatgaaatacagc
acccattcaacaggctatcatatttacaagtgtgaaaatatgtacatgtctggttatcac
ttgtctcctggagttcacctaaaaaaagtgggggagcatgtgttactgtgtgctagaatg
cagttacacaagggagtgatcgacgagtttcttccatggcctttcaatgagaaaattcag
ttgaccgtcaaacatccatcgagacagaagcactaccagttgatagaggaaactggagat
ttactcgggagttacggaagaccccaacaatcaagtaacagtggtgtgtgtttcatggcc
agttcagtccgcttggatgatctgaaacgtgaaggatacgtcgcggacgacaaccttcag
atagtgtgggagcttgttccgaaagacttacccaaacaatattga
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