Dermacentor silvarum: 119465265
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Entry
119465265 CDS
T07348
Name
(RefSeq) TNF receptor-associated factor 6-B-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv04120
Ubiquitin mediated proteolysis
dsv04140
Autophagy - animal
dsv04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119465265
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119465265
04140 Autophagy - animal
119465265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsv04131
]
119465265
04121 Ubiquitin system [BR:
dsv04121
]
119465265
Enzymes [BR:
dsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119465265
Membrane trafficking [BR:
dsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119465265
Ubiquitin system [BR:
dsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
119465265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-C3HC4_3
zf-C3HC4
Syntaxin-18_N
DUF3450
HSCB_C
Motif
Other DBs
NCBI-GeneID:
119465265
NCBI-ProteinID:
XP_037581996
EnsemblRapid:
LOC119465265
LinkDB
All DBs
Position
9:58216157..58258311
Genome browser
AA seq
527 aa
AA seq
DB search
MSTDAPCPMAFQTQRCTVFGFSQELDWRPLYFAEPIPAHRICDGCGLLPRVTVFLPCRHV
LCKTCYEQCVVDDQHSCPLDGDAFLDEDVQWGDFPLENLLKRKVHCWNKEYGCESVMAAS
EICKHFHQDCDHHSTCCPRCTAVVRCRSVRAHLQSNCTDYVAFNKDAGPETRCSDQQAIL
LALKATVEERVGEMKERLDTLSCENRVQIDRTNELHQCINTLKEMLPQPSENATSQDAAP
QSTNNMSAIQGDNNNFVAEADVPFNRSQLVEEMSTLNEALSKAMNAEAQKTSEMLEKNEC
VINNLHAQLRQQLSSDRDILKSISCGVIKLNETFGKELERATKRIGETVTANDARVVAIK
EFDTKVTDQQMRLLAFSTKNLKRYTFFIDGVKSLKRSAQAEGFCTYYVDRIYLSGYCMSP
GLYLKKSGDSVRLHMCIQLYKGVIDEFLPWPFHKGTRLSVANKSTDQQRHLVNKASLGLK
GFCRPGTSVNTGVYFPDSSFLLEDLERDGYVENDVLHVTWELLPTNP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggatgcgccgtgccccatggcttttcaaacccagcggtgcactgttttcgga
ttttcacaggaactagactggagacctttgtacttcgccgagcccattccagcgcacaga
atatgcgacggatgtggtttgctgcccagagtgaccgtctttctgccgtgtcgacacgtg
ctgtgcaaaacctgctacgagcagtgcgtggtcgacgaccagcactcctgcccactggac
ggtgacgcttttcttgatgaagacgttcagtggggagactttcctttggagaacctgctg
aagcggaaggtccactgctggaataaagaatacggttgcgagagtgtgatggctgcttcg
gagatctgcaagcactttcaccaggattgtgaccaccattccacctgttgtcctcgctgc
acagcagttgtccgctgtcgcagcgtgcgggcacatctgcaaagcaactgcacggactac
gttgcttttaacaaagacgctgggccggagacaagatgcagtgatcagcaagcaattttg
ttggctttgaaggcaaccgtcgaggagagggtaggcgaaatgaaagagagacttgacact
ttgtcatgtgaaaatagagtgcaaattgatagaaccaacgagctgcaccagtgtataaac
acattgaaagaaatgttgccacagccatcggaaaatgccacaagccaggatgcggctccc
cagtctacaaataacatgtctgctattcaaggagacaataataattttgtcgcagaagct
gatgtgcccttcaacaggagccaacttgtagaagaaatgagcactttaaatgaagcactg
agcaaagctatgaatgcggaagcccagaagacgtcagaaatgttggaaaagaatgagtgt
gtcataaacaatcttcatgcacagttgagacaacagttatcgtctgatcgcgacatcctt
aagagtatttcctgtggtgtaatcaaactgaacgagactttcgggaaagaactggaacga
gccacaaagagaattggcgaaactgtgactgcaaacgatgctcgtgtggttgccataaaa
gaatttgatacgaaagtaacagaccagcaaatgagacttcttgcattcagcactaaaaat
ttaaagcgttatacattttttattgacggagtcaaatcactgaaaagatcagcacaagca
gaaggcttctgtacttactatgtcgaccggatatacctctccggctactgcatgtcgcca
ggtctttacttaaaaaaaagtggcgactcagtgcggctgcatatgtgcattcagctttac
aagggagtaattgatgaatttctgccatggcctttccataaaggcacacggctgagtgtc
gcgaataaatcgacagatcaacagcgtcaccttgtgaataaagcttccctaggcctcaaa
ggtttttgtcgacctggcacgtcagttaacacaggagtgtactttcctgattcttcgttt
ctcttggaagatcttgaacgggatggctatgtggaaaacgatgtgctgcacgttacatgg
gagcttttgccaacaaatccttga
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