Dermacentor silvarum: 125939969
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Entry
125939969 CDS
T07348
Name
(RefSeq) uncharacterized protein LOC125939969
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
dsv
Dermacentor silvarum
Pathway
dsv04120
Ubiquitin mediated proteolysis
dsv04140
Autophagy - animal
dsv04144
Endocytosis
dsv04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
dsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125939969
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125939969
04140 Autophagy - animal
125939969
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125939969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsv04131
]
125939969
04121 Ubiquitin system [BR:
dsv04121
]
125939969
Enzymes [BR:
dsv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125939969
Membrane trafficking [BR:
dsv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125939969
Ubiquitin system [BR:
dsv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125939969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4
zf-TRAF
MATH_2
zf-RING_UBOX
CEP104_ZnF
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
125939969
NCBI-ProteinID:
XP_049511520
LinkDB
All DBs
Position
9:119927138..119931898
Genome browser
AA seq
410 aa
AA seq
DB search
MATGQRPARYTLSGFSCEYDWRPTEFEESVDVDKICASCLVLPRGTAQLGCSHVLCEQCY
MASLESGQRCPIDDAAYAEGEVKWLSTQPQELESMRVKCWNAKHGCPFVVTLSDLPAHYY
HKCRFHTVSCDRCLSEVPRSSMRDHRNVCANRDDGLQSQEGGGVTAAEASGVLKPAGDSE
KLPGLSLTEVADFQYSLETKLNSLVEHIHGREATGVSKSELITAAVSLLRSVGLLSLSAT
WRPQGLAVVVSRVRYFARQVPEYAEEVYSALSNVCGYSLRLGVRCERKLVSPTTSSSDKD
KEDLVLRFKVQLCPAANNSALQWPFRKSLTLSVIHPQDSTKEVRFFLNTSMMASEPSFQM
PGRTENPPFTVGGPLHVSALAGCQYWSYGTLQLRLSMSLSSGGQHEESND
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggtcagcgcccagcgcgctacactttaagtggcttttcgtgcgagtacgac
tggaggccaactgagttcgaagagtccgtcgacgtcgacaaaatctgcgcgtcgtgtctg
gtgttgccgaggggaacggcgcagttgggctgctcgcatgtgctttgcgagcagtgctac
atggcgtcgctcgaaagcggccagcgctgcccgatcgacgacgcagcctatgccgaaggt
gaggtcaagtggctctccacacagccgcaggaactggaaagcatgcgggtcaagtgctgg
aacgcaaagcacggctgtcctttcgtggtgacgctaagtgatctcccggctcactactac
cacaagtgtcgattccacaccgtctcctgcgatcgctgtctctccgaagtaccgaggtcc
agcatgcgcgatcaccgaaatgtttgcgctaaccgtgacgacggcctgcaatctcaagaa
ggcggcggagtgacggcggctgaggcgtctggcgtcttgaagccggccggcgactccgaa
aagcttcccggactctctctcaccgaggtcgccgacttccagtatagcctcgagaccaaa
ctgaactcgctcgtcgagcatattcacggcagggaagccaccggcgtctccaagtctgag
ttaattaccgcagcagtcagcctcctgcgttccgtcggtctgctatccctctcggcaacg
tggagaccacaggggctagccgtcgtggtcagcagggttcgctacttcgccagacaggtt
ccggagtacgcggaggaggtgtacagcgcgctgtcgaacgtctgcggctactccttgagg
ctcggggtccgctgcgagcgcaagctggtgtctccgacaacatcctccagcgacaaagac
aaggaggacctcgtgctgaggttcaaggtccagctctgtccagctgccaacaactcggcg
ctgcaatggccctttcgcaagtctctgacgctctcggttattcatccgcaagattcgacc
aaggaggtccgcttcttcctcaacacatccatgatggcaagcgagccttctttccagatg
cctggtcgcacggagaaccctccttttactgttggtggtccacttcatgttagtgcacta
gcgggatgccagtactggagctacggtaccctgcaactgcggctaagtatgtctctttca
tctggtggccaacatgaagaaagcaatgactga
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