Deinococcus radiopugnans: QR90_04560 Help Entry QR90_04560        CDS       T03508                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism dsw  Deinococcus radiopugnans Pathway dsw03030   DNA replication dsw03410   Base excision repair dsw03420   Nucleotide excision repair dsw03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dsw00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     QR90_04560    03410 Base excision repair     QR90_04560    03420 Nucleotide excision repair     QR90_04560    03430 Mismatch repair     QR90_04560  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dsw03032]     QR90_04560    03400 DNA repair and recombination proteins [BR:dsw03400]     QR90_04560 Enzymes [BR:dsw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      QR90_04560 DNA replication proteins [BR:dsw03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      QR90_04560 DNA repair and recombination proteins [BR:dsw03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      QR90_04560    NER (nucleotide excision repair)     GGR (global genome repair) factors      QR90_04560    MMR (mismatch excision repair)     DNA ligase      QR90_04560   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       QR90_04560 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH BRCT_2 Zn_Ribbon_TF Auto_anti-p27 Motif Other DBs NCBI-ProteinID:  AIZ44523 UniProt:  A0A0A7KJ08 LinkDB All DBs Position 942862..944937 Genome browser AA seq 691 aa AA seqDB search MDQAELTPGEYEQYLSLSAAVARHNRAYHEEDAPTIPDSEYDALVRRLRALEAQHPEWAE QAAQAVGADTSPAQAVGGAPSTAFQPVDHPTPMTSLDNVFSDAELGEWREKLARALNLPP EHDDFVFTGELKIDGLSVNLYYVNGQLQWAATRGNGSVGEIVTAQVATVPGIPTVLDGLS GELEVRGEVYMSRADFAAYNAQAEELGTPLLKNPRNGAAGALRQKDPEVTRTRNLKAIFY ALGKRDGVPATTQGEVLAWLAAQGFPISTHSEGLSGIAAAADYHARMTAGRQDFEFDADG TVFKVDSLRLQEEAGFTSRAPRWAIAYKFPVEEVETVLEGITVNVGRTGKLTPLAHLSPR LIEGSTVSKATLHNQDFVRDLDLHIGDTVVVRKSGGVIPQIMRVIVDKRPADAQPFVFPD TCPECGQPVTRDPEDANTYCTNPACPAQTYKLVEYFVSRGAMDIAGVGGKLIAQLLTLGL IHDAADLYALNAETLAGLERGGEKKAANILAELEASKTRPLWRLINALGLDHVGERNAQA LARAFGTLDALMAATPEQIEAVPGLGKVIGASVAVALKEEGYVTLLNKLKAAGVNPQEEE VRRGEQLEGLNFVITGSLGRPRDAIKAELEAAGGRVTGSVTGKTSYLIAGEDAGSKLTRA QELGVAVLDEAGLAALLAEKGVENGEASAQT NT seq 2076 nt NT seq  +upstreamnt  +downstreamnt atggatcaggccgagttgacccccggtgaatacgagcagtacctcagtctcagcgccgcc gtggcccgccacaaccgcgcgtaccacgaggaggacgcgcccacgattcccgacagcgag tacgacgcgctggttcggcgcctgcgtgccctggaagcccagcatcccgaatgggccgag caggccgcgcaggcggtaggggccgacaccagtcccgcgcaggcggtggggggggcgccc agcacggccttccagccggtagaccaccccacccccatgaccagcctggacaacgtcttc agcgacgccgaactgggcgagtggcgcgagaagctggcccgcgcgctgaacctgcccccc gagcacgacgacttcgtgttcacgggcgagctgaagatcgacggcctgagcgtgaacctg tactacgtgaacggtcagttgcagtgggccgccacgcgcggcaacggctccgtcggcgag atcgtgaccgcgcaggtggcgacggtgccgggcattcccaccgtcctggacggcctgagc ggtgaactggaggtgcgcggcgaggtctacatgagccgcgcggacttcgccgcctacaac gcgcaggccgaggaactgggcacgccgctgctcaagaacccccgcaacggcgcggcggga gcgctgcggcagaaagacccggaggtcacgcgcacccgcaacctcaaggccatcttctac gcgctgggcaagcgcgacggcgtgcccgccactacccagggcgaggtgctggcgtggctg gccgcccagggctttccgatcagcacccacagcgaggggctgagcggcatcgccgccgcc gccgactaccacgcccgaatgactgccggacgtcaggacttcgaattcgatgccgatggc acagtgttcaaggtcgattcgctgcgcctgcaggaggaggcgggctttaccagccgcgcc ccgcgctgggccattgcctacaagttcccggtggaggaagtggagactgtgctggagggc attacggtcaacgtgggccgcaccggcaagctgaccccgctggcccacctgtcgccgcgc ctgatcgagggcagcaccgtcagcaaggccacgctgcacaaccaggatttcgtgcgggat ctggatcttcacattggggacacggtggtggtgcgcaaatccggcggcgtgattccgcag atcatgcgtgtgatcgtggacaaacgcccggcagacgcccagcccttcgtctttcccgac acctgccccgagtgcggccagccggtcacgcgcgatcccgaggacgccaacacctactgc accaatccggcctgcccggcgcagacctacaaactggtggagtatttcgtgtcgcgcggc gccatggacatcgcgggcgtggggggcaagctgatcgcgcaactgctgacgctgggcctg atccacgacgcggcagacctatacgccctgaacgccgagacgctggccgggctggagcgc ggcggcgagaagaaggccgccaacatcctggccgagctggaggccagcaagacccgcccg ctgtggcgcctgatcaacgcgctgggcctggatcacgtgggcgagcgcaacgcccaggcg ctggcccgcgccttcggcacgctggacgcgctgatggcggccactcccgagcagatcgag gccgtgccggggctgggcaaggtgatcggcgcaagtgtggcggtggccctgaaagaagag ggctacgtcaccctcctgaacaaactcaaggcggcgggcgtcaacccgcaggaggaggag gtgaggcgcggagagcaactggagggcctcaacttcgtcatcaccggcagcctgggccgt ccgcgcgacgccatcaaagccgagctggaggccgccgggggccgcgtgactggcagcgtc accggcaagacctcgtacctgatcgctggggaggacgctggaagcaaattgacccgcgcg caggagctgggcgtggccgtgctggacgaggccggactggcggctctgctggcggagaag ggcgtagaaaacggggaggcgtccgcccagacctga

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