Dendrobates tinctorius (dyeing poison frog): 141060534
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Entry
141060534 CDS
T11000
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dtc Dendrobates tinctorius (dyeing poison frog)
Pathway
dtc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dtc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
141060534 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtc03400
]
141060534 (LIG4)
Enzymes [BR:
dtc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
141060534 (LIG4)
DNA repair and recombination proteins [BR:
dtc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
141060534 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
DUF7890
Motif
Other DBs
NCBI-GeneID:
141060534
NCBI-ProteinID:
XP_073412907
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MSSNILPLKTVAAQVPFADLCSTLERIQKCKNRSEKTNILKQFIDSWRKFHNALHKNEPT
TKDSFYPAMRLILPQLERERMAYGIKETLLAKLYIKVLGLPKDGKDALKLLNYRTPTGSN
SDAGDFAAIAYFVLKSRCRKEGTLFIKDVNDQLDSIASNNAGRKKELIEKSLLHLITNTT
ALEQKWLIRMIIKDMKLGFSQQTVFSIFHPDAAELHNVTTDLEKVCLQLHDPSVCLSDVS
ISIFSAFKPMLAAIANIQHIEKQMNQQSFYIETKLDGERMQMHKDGDVYKYFSRNGFEYT
QQFGGSPLEGTLTPFIHNVFCIDIQNCILDGEMMAYNPNTETFMQKGNKFDIKRMVDDSE
LQTCFCVFDVLMFNDQKLAHETLWKRYDMLRGIFTPVTGRIHVVHKTEASTKKNVIDALN
EAIDNREEGIMVKDPMSIYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGLRGGM
MSHFLCAVAVKPHPGEKPSVFHSLCRIGSGYTMKELYDLGLKLAPHWKRYRKKDPPTNLL
CATEKPEVFIEPCNSVIIQVKAAEIVHSDMYKTNCTLRFPRIEKIREDKEWYDCMTLDDL
EQFREKASGKLASKHLDFSEEPPEKKRKNVPKISKVIGVVSHLKAPDLSNISKQSNMFEE
VEFCVMSGTDIHSKANLESMIASCGGIVVQNPGEDTYCVIVGTTNVRVKNVISSNKHDVV
RAAWLLECFENKTFVPWQPNHMIHMCPSTKEHFASEYDCYGDSYVTDTNESELKDLFTRI
PDTKDKIPLDMIADLEHRYPWENSSSSMFRQCVVYVDIYTVLNNPFTKIENSSLSIRALE
LRFHGAKVVSHLEEGVSHVVVGDDLSRLAEIKSLRRTFTKKYKIVPILWVVDSLKMAELQ
MEQDYLL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaatatcctgcccttaaaaacagtggctgctcaggtaccttttgcagatctg
tgtagtactttagaaagaattcagaaatgcaagaacagatcagagaaaacaaatatttta
aaacaatttattgactcctggagaaaattccacaatgcccttcacaagaacgaacctact
actaaagactccttctatccagcaatgcgacttattttaccacagttagaaagagagagg
atggcttatgggattaaagagactctgcttgccaaactctatattaaagttcttggtttg
cccaaagatggcaaagatgctcttaaacttttaaattatcgaactcctactggctccaat
tcagatgccggcgactttgctgcaattgcatactttgtgcttaagtcacgatgccgaaaa
gaaggaaccttgttcattaaggatgtgaatgatcagttagattcaatagctagcaacaat
gcagggaggaagaaggaacttatagagaaaagtctgctgcacttaattactaacaccact
gctctggaacagaagtggcttataaggatgattataaaggacatgaagcttgggtttagc
cagcaaacagtcttttccatctttcatcctgatgctgcagaactacataatgtcaccaca
gatttagaaaaagtgtgtttacagctacatgaccccagtgtgtgcctgagcgacgtttcg
atctcaatattttctgcctttaaaccgatgcttgctgcaattgctaacattcaacacata
gaaaagcaaatgaaccaacagagtttttatattgaaacaaagctggatggtgaacgaatg
cagatgcacaaagatggagatgtgtataaatacttttctcggaatggctttgagtacacc
cagcagttcggtggttctccccttgaaggcactttaacgccatttattcataatgtcttt
tgtattgatatccaaaactgcatactggacggtgagatgatggcctacaatcctaacact
gagacattcatgcagaaaggaaataagtttgacatcaaaaggatggttgatgattcagaa
cttcaaacttgtttctgtgtgtttgatgttctgatgtttaatgaccagaagttagcccat
gaaacactttggaaaaggtacgacatgcttcgtggcatatttaccccagttaccggaagg
attcacgtagttcacaaaactgaagctagcaccaaaaagaatgtaattgatgcattaaat
gaggcaatcgataaccgtgaggaaggaattatggtgaaagacccaatgtccatatataag
ccagataaacgtggtgaaggctggttaaagatcaaacctgaatatgttaatggactcatg
gatgaattggatcttttaattgttgggggatattggggcaagggtctgcgtgggggtatg
atgtctcattttttgtgtgcagtggcagtgaaaccacatccaggagagaagccatctgtc
tttcattcactttgtcgtattgggtctggctacaccatgaaggaattatatgacttaggt
ttaaagttggctccccactggaaacgttatcgaaaaaaagatccacctacaaatctactg
tgtgcaactgaaaagccagaagtgtttattgagccttgtaattctgttatcattcaagtc
aaggcagcagagattgttcacagtgatatgtacaaaaccaattgtactctccggtttccc
cgaattgaaaagatcagagaagacaaggaatggtatgattgtatgacacttgatgacttg
gaacaatttcgagaaaaagcttctgggaaattagcttcaaaacacttggatttcagtgaa
gagccaccagaaaagaaaagaaaaaacgttccgaagattagcaaagtcatcggtgtggtt
tctcatttgaaagcgcccgatcttagcaacatctcaaagcagtcaaatatgtttgaagag
gttgagttctgtgtgatgagtggaacagatatccattcaaaggcaaatctagagagcatg
atagcttcttgtggtggcatagtagtacaaaatcccggagaagacacatactgcgttatt
gtaggaactaccaatgtcagagtgaaaaatgttatctcatctaataagcacgatgttgtc
agagctgcttggcttcttgagtgctttgaaaataaaacctttgtaccttggcagcctaat
catatgattcatatgtgtccatccaccaaggaacactttgctagtgaatatgactgctat
ggtgacagttatgtcacagatactaatgagtctgagctgaaggatctgtttaccagaata
cctgacacgaaggacaaaatccccctggacatgattgctgacctagaacatcgctatcca
tgggaaaattcttctagcagtatgttccgtcaatgtgttgtatatgtagatatttataca
gttcttaacaacccatttactaaaattgaaaactcttctttgagtataagagcactggag
ttacgttttcacggagcaaaagtagtgagccatcttgaagaaggagtttctcatgttgtg
gtaggagatgacttgtctcggttagcagaaattaagagtctgagaaggacatttaccaaa
aagtataagattgttccaattctttgggtagtcgattcgttgaagatggcagaacttcag
atggagcaggattacttattataa
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