Deefgea tanakiae: K4H28_12050
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Entry
K4H28_12050 CDS
T08586
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dtk
Deefgea tanakiae
Pathway
dtk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dtk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K4H28_12050 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dtk03400
]
K4H28_12050 (nth)
Enzymes [BR:
dtk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K4H28_12050 (nth)
DNA repair and recombination proteins [BR:
dtk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K4H28_12050 (nth)
Prokaryotic type
K4H28_12050 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QZA77030
LinkDB
All DBs
Position
complement(2609215..2609865)
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AA seq
216 aa
AA seq
DB search
MNKQTRHTFYARLAELEPNPKTELNYSTPFELLTAVLLSAQATDVGVNKATKILFPVANT
PAGILALGQAGLESYINTIGLYRSKAKHLLETCRMLIELHGGEVPRDRESLEALPGVGRK
TANVVMNTAFGMPTMAVDTHIFRLGNRTGLAPGKDVRAVEDKLLKVTPPEFLLNAHHWLI
LHGRYICKARKPECWRCVVNDVCDYRSKIMLPPKGF
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaacaaacccgccacaccttctatgcccgtttggccgagttagaacccaacccg
aaaactgaactgaattacagcacgccgtttgagttgctcactgcagtgttgttgtcggcg
caggcgacggatgtgggtgtgaataaagcgaccaagattttatttcccgttgccaatacc
cctgctgggattctggcgctagggcaggcgggacttgagtcctatatcaataccattggc
ctctatcgtagcaaggctaagcatttgctagaaacctgccggatgttgattgagctgcat
ggcggtgaagtgccacgtgatcgggaaagtcttgaggctttgcccggcgtggggcgcaag
accgcgaatgtagtaatgaatacggcatttggcatgccaaccatggcggttgatacgcat
atttttcgtctcggcaatcgaactgggttagcaccggggaaagacgtgcgcgcggtggaa
gacaaactattgaaagtgacaccgcccgagtttttgcttaatgcgcatcactggctgatt
ttgcacggccgctatatctgcaaagcgcgcaaacctgaatgctggcgctgtgtggtgaat
gatgtttgcgattaccgcagcaaaatcatgttgccgccgaaagggttttga
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