Dyella thiooxydans: ATSB10_08950 Help Entry ATSB10_08950      CDS       T04308                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism dtx  Dyella thiooxydans Pathway dtx03030   DNA replication dtx03410   Base excision repair dtx03420   Nucleotide excision repair dtx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:dtx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     ATSB10_08950    03410 Base excision repair     ATSB10_08950    03420 Nucleotide excision repair     ATSB10_08950    03430 Mismatch repair     ATSB10_08950  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:dtx03032]     ATSB10_08950    03400 DNA repair and recombination proteins [BR:dtx03400]     ATSB10_08950 Enzymes [BR:dtx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      ATSB10_08950 DNA replication proteins [BR:dtx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      ATSB10_08950 DNA repair and recombination proteins [BR:dtx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      ATSB10_08950    NER (nucleotide excision repair)     GGR (global genome repair) factors      ATSB10_08950    MMR (mismatch excision repair)     DNA ligase      ATSB10_08950   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       ATSB10_08950 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT DUF7340 Zn_ribbon_PADR1 Motif Other DBs NCBI-ProteinID:  AND68349 UniProt:  A0A169GQ89 LinkDB All DBs Position 945955..948339 Genome browser AA seq 794 aa AA seqDB search MTVPHDIAARAAALREQIEQANYQYHVLDDPTIPDAEYDRLMRELEALEAQYPALASPDS PTRKVGARATGGFAEVRHAIPMLSLGNAFSEEGDTDRDRFHEVAEFERRIEQTLDRRDPV FSVEPKLDGLAISLRYEHGVFVQGATRGDGETGEDVTANLRTVRAIPLRLRGADWPEVLE VRGEVIMLRRDFEAFNEHARSYGEKTLANPRNGAAGSLRQLDPAITQKRRLSFFAYAVGV VEDGELPPTHSQTLQKLRDWGFPVSPEVSTATGFDGLIAYYRAIGAKRDALPYDIDGVVY KLDDYDGQRIMGFVSRAPRWAIAHKFPAQEQMTRVEAIEIQIGRTGAATPVARLAPVQVA GVTVTNATLHNADQVARLDVRVGDMVIVRRAGDVIPEVVRVVEEHRPAHTHPWHMPAHCP VCGSALVREEGAAAYRCSGGLFCAAQRKEALIHFAARRAMDIDGLGERYVDALVEFDMVR TPADLYALTVDDFVAMKQRADERDGTVPETVKQGKIATRWAENLVEAIDASRTTTLARFL FALGIMHIGESTAKTLAAWLGRLEFVRSMPAPVLRVLPDIGAEVAGSIAAFFAQKGNQQV VDALLAAGVHFTDEGEPSPKLRERLDLGVLLDIANVSKLGPKSTKLLAAQYATLEALEQA GSAHWIVAGVPQAAAINLEAMLADRHHRHAFARAEQAMRHLLAAIPEGAAGDEAPLAGQT VVLTGTMPSLSRDQAKDLLESLGANVAGSVSKKTSFVVAGEAAGSKLDKANELGVPVWDE AQLLALLAEHGVAP NT seq 2385 nt NT seq  +upstreamnt  +downstreamnt atgaccgttccccacgacatcgccgcccgtgccgccgccctgcgcgaacagatcgagcag gcgaactaccagtaccacgtgctggacgatccgacgatcccggacgccgagtacgaccgc ctgatgcgcgaactggaggcgctggaagcgcagtacccggcgctggcttcgcccgattcg cccacccgcaaggtcggggcccgcgccaccggcggcttcgccgaggtgcgtcatgccatc ccgatgctgtcgctgggcaacgccttcagcgaggagggcgacaccgaccgcgatcgcttc catgaagtggccgagttcgagcggcgcatcgagcagacgctggaccgccgcgatccggtg ttctcggtcgagcccaagctggacggcctggcgatcagcctgcgctacgagcacggcgtg ttcgtgcagggcgcgacccgcggcgacggcgagaccggcgaggacgtcaccgccaacctg cgcacggtgcgcgcgatcccgctccgcctgcgcggtgccgactggcccgaggtgctggag gtgcgcggcgaagtgatcatgctgcgcagggacttcgaggccttcaacgaacacgcccgc agctacggcgaaaagaccctggccaacccgcgcaacggcgcggccggttcgctgcgccag ctcgatccggcgatcacgcagaagcgacggctgagcttcttcgcctacgccgtcggcgtg gtcgaggacggcgagctgccgccgacccactcgcagacgctgcagaagctgcgtgactgg ggcttcccggtgtcgccggaggtgtccaccgccaccggcttcgacggtctgatcgcctac taccgcgcgatcggtgccaagcgcgatgcgctgccgtacgacatcgacggcgtggtctac aagctggacgattacgacggccagcgcatcatgggcttcgtctcgcgcgcgccgcgctgg gcgatcgcgcacaagttcccggcgcaggagcagatgacccgggtcgaggcgatcgagatc cagatcggccgcaccggcgcggccaccccggtggcgcggctggcgccggtgcaggtggcc ggcgtgacggtgaccaacgccacgttgcacaacgccgaccaggtggcgcggctcgacgtg cgcgtcggcgacatggtgatcgtgcgccgcgccggcgacgtgattcccgaggtggtgcgc gtggtcgaagagcatcggccggcacacacccatccctggcacatgccggcgcattgcccg gtgtgcggttcggcgctggtgcgcgaggagggcgccgccgcctaccgctgctccggcggc ttgttctgcgccgcgcagcgcaaggaggcgctgatccatttcgccgcgcgccgcgctatg gacatcgacggcctgggcgagcgctacgtcgacgcgctggtcgagttcgacatggtcagg acgccggccgacctctacgcgctgaccgtggacgatttcgttgccatgaagcagcgtgcc gacgagcgcgacggcacggttcccgagaccgtcaagcagggcaagatcgccaccaggtgg gcggagaatctggtcgaggcgatcgacgccagccgcaccactacgctggcgcgcttcctg ttcgcgctgggcatcatgcacatcggcgagagcacggccaagacgctggcggcctggctc ggccgcctggagttcgtgcgcagcatgccggcaccggtgttgcgggtgctgccggacatc ggcgccgaggtggccggttccatcgccgcgttcttcgcgcagaagggcaaccagcaggtg gtcgatgcgctgctggccgccggcgtgcatttcaccgacgaaggcgaaccgtcgccgaag ctgcgcgagcggctggacctcggcgtgctgctggacatcgccaacgtgtccaagctcggc ccgaagagcacgaaactcctggccgcgcagtacgccacgctggaggcgctggagcaggcc ggttcggcgcactggatcgtcgccggcgtgccgcaggccgcggcgatcaacctggaggcg atgctggccgatcgtcaccatcgccatgccttcgcccgggctgaacaggccatgcggcac ctgctcgctgcgataccggaaggtgccgccggcgacgaggcacccctggccggacagacc gtggtgctcaccggcacgatgccttcgctcagccgcgatcaggcgaaagaccttctggaa tccctgggggccaacgtcgccggctcggtctccaagaagaccagcttcgtggtggctggc gaagcggccggctccaagctcgacaaggcgaacgagctgggcgtgccggtatgggacgag gcgcaattgctggcgctgctggccgaacatggggtcgcgccatga

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