Duganella dendranthematis: HH213_29145
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Entry
HH213_29145 CDS
T06560
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dug
Duganella dendranthematis
Pathway
dug01501
beta-Lactam resistance
dug01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dug00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH213_29145
01503 Cationic antimicrobial peptide (CAMP) resistance
HH213_29145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dug03036
]
HH213_29145
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dug02000
]
HH213_29145
01504 Antimicrobial resistance genes [BR:
dug01504
]
HH213_29145
Chromosome and associated proteins [BR:
dug03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HH213_29145
Transporters [BR:
dug02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HH213_29145
Antimicrobial resistance genes [BR:
dug01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HH213_29145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
Beta-barrel_RND
YknX_C
BSH_CusB
Biotin_lipoyl
BSH_YknX
RND-MFP_C
BSH_Fcp1
CzcB_C
NQRA_N
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
QJD93799
UniProt:
A0ABX6MIQ0
LinkDB
All DBs
Position
complement(6370490..6371650)
Genome browser
AA seq
386 aa
AA seq
DB search
MAKRPTTKRMLIMVGLVILLIAVLAFGKFLQIKKLIASAPKPAAQVVTAVKAQTAEWQPQ
LTSVGTLAPVRGVDVTTEIAGLVREVRFKSGDEVKAGQVLFEMNADSDIAQLRALQANAD
LAGTTLKRDKLQLSAQAISQAQVDGDEADLKAKQALVSQQKALVDKKTIRAPFAGKLGIT
AINPGQYLNPGDKLVTLQTIDTLYADFFIPQKQLASLSIGQKLNLTSDSYPGVGFAAKVT
SISPKIDAATRNVQVQATLPNAKRQLLPGMFANVSLDQGELKKYLTLPQTAITYNPYGST
VFLLAPPPADSKDAMKDDKGQAYLVAQQVFVTTGPTRGDQVAILTGLKEGQTVVTSGQLK
LKNGTPVVIDNKVQPANSPNPTPQEH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgaccgacgaccaagcgcatgctcatcatggtagggttggtgattttactg
atcgctgtactcgcgttcgggaaatttttacagattaaaaaattgatcgccagcgcgccc
aagccggccgcgcaggtggttaccgccgtcaaggcgcaaaccgcagaatggcagccgcag
ctgacctccgtcggcacgctggcgccggtgcgcggtgtcgatgtcaccaccgagatcgcc
ggcctggtgcgcgaagtgcgcttcaagtcgggcgacgaggtaaaagcagggcaggtgctg
tttgagatgaatgccgattccgacatcgcccagttgcgcgcgctgcaagccaacgccgat
ctggccggcaccacgctcaagcgcgacaagctgcaactgtcggcgcaagccatcagccag
gcgcaggtcgacggcgacgaagccgacctgaaagccaagcaggcgctggtctcgcagcag
aaagctctggtcgacaagaagaccatccgcgcgccgttcgccggcaagctggggatcacc
gccatcaatccgggccagtacctgaatccgggcgacaagctggtgacgctgcaaaccatc
gacaccctgtacgccgatttcttcatcccgcaaaagcagctagccagcctgtccatcggc
cagaagctgaacctgaccagcgattcctatcctggcgtgggctttgccgccaaggtaact
tcgatcagtcctaaaatcgatgcggccacccgcaacgtgcaggtgcaggccacgctgccg
aacgccaagcgccagctgttgccgggcatgttcgccaacgtcagcctggatcagggggag
ctgaaaaaatacctgaccttgccgcagaccgccattacctacaacccgtatggctcgacc
gtgttcctgctggcgccgccgccggccgattccaaggatgccatgaaggatgacaaaggc
caggcttacctggtggcgcagcaggtgttcgtgaccaccggtccgacccgtggcgaccag
gtggcgattctcaccggcttgaaggaaggccagaccgtggtcaccagcggccagctgaaa
ctgaagaacggtacgccggttgtgatcgacaacaaggtgcagccggcgaacagtccgaat
ccgacgccgcaggaacactga
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