Duncaniella sp. B8: FDZ78_01545
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Entry
FDZ78_01545 CDS
T05963
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dun
Duncaniella sp. B8
Pathway
dun01501
beta-Lactam resistance
dun01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FDZ78_01545
01503 Cationic antimicrobial peptide (CAMP) resistance
FDZ78_01545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dun02000
]
FDZ78_01545
01504 Antimicrobial resistance genes [BR:
dun01504
]
FDZ78_01545
Transporters [BR:
dun02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FDZ78_01545
Antimicrobial resistance genes [BR:
dun01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FDZ78_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
QCP71340
UniProt:
A0AAE6ENE8
LinkDB
All DBs
Position
336618..339671
Genome browser
AA seq
1017 aa
AA seq
DB search
MVRYLLNHRIAVIMAFLAMVILGSVTYTTLPVSLLPDIDIPHITVQVTGDNVSARELENT
VVTPLRRQLMQVGGLGEIKSETRDGSAIISLTMDYGVNTDLAFIEVNEKIDAAMNSLPKT
VTRPKAVKASATDIPVLYLQMTLRDENGRMSFLDMSGIAENIVRRRLEQQPEIAMVDITG
VPGKVLRVTPDLDRMTQAGVTVEDLESALTANNVEPGSMTVRDGYYEYNITVTNLLRSVE
DVERIKLLKGGKIMELGDFAEVSLTNRVPSGYSLHNSKRAVTLAIIKHGEESMDAMNKAL
DSTIKYFSDRYPEIEFSKTRSQTELLDFTISNLEQNLILGLLLVFVVCLIFMRSARSSFI
IGLSIIVGVILTFLLFYLFNVSINIISMAGLILAVGMMIDNSVIVTENITQFRHRGNGLM
DACVKGTDEMITPMLSSSLTTVAVFVPLIFMSGIAGAIFSDQAFSITAGLAASYIVGITL
LPVLYYLFENKKSGIKEGKSADSNQNQSPASHQSFISLYDRGMDFCFRHKWTFIASTLLT
VPLCVVMFMLMRQERMPEIDSNETIVRIDWNENINLDTNRSRVEALSDSASVESSAYIGM
QDYMLSSDFDLSTSEAELYFKTSGPEDISPLQNRIADRIRDKYPSATVSFHKTGNIFEKI
FSSDEADIEARISNRNKDAGEIDSLASLCGRIGEATGESLSPVPLRRQIDISVDRTLLAI
YNVDYSEVQRALCTAFKGNTVSTLRSYQEYTPIEISGREQSVGEILGNAFVRSRADKNGV
RTEIPLRSLVTVGHSRDLKTITAGVAGEYVPIGLEVPGREAKVIETIRETVAADGSHEVE
FAGGFFSNARMMRELTVILLVSVMLMYFILCAQFESFLQPLIVLLEIPVDTFFALLALMI
FGQTLNLMSAIGIIVTCGIVVNDSILKLDAINELRKGGMPLTEAIHTAGRRRLRAIIMTS
LTTVFAMLPVLFTSDMGSELQRPLAIAMIGSMVVGTLVSIFVIPLFYWLIYRKHENK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtccgttatctcctgaatcatcgcatagctgtcatcatggcgtttcttgctatggtg
atactcggaagtgtgacatacacaacgcttcccgtctcgctgttgcctgacatagatatc
cctcacattaccgtgcaggtcacgggtgacaatgtctcggcgcgcgaactcgaaaatacc
gttgtcacacccttgcgccgtcagctcatgcaggtcggcggacttggcgaaatcaagagc
gagacccgcgacggttcggcgataatctcgctgacaatggactatggtgtcaacaccgac
ctcgcctttatagaagtcaatgaaaagattgacgcggcaatgaactccttgcccaagacc
gttacacgaccaaaggctgtcaaagcgagcgctaccgacataccggtcttgtatctgcaa
atgaccctgcgagacgaaaacggcagaatgtcatttcttgacatgtcaggaattgccgaa
aacattgtcagacgccgtcttgaacagcagccggagattgcaatggtagacataacgggt
gtgcctggaaaagttctgcgggtcacccctgatttagaccgtatgacacaagccggtgtg
accgtcgaagatcttgaatccgctctcaccgccaacaatgtcgagcccggttcaatgacc
gtacgcgacgggtactatgaatacaacataaccgtcaccaatctcctgcgctcggttgag
gatgtggagcggatcaagctccttaagggcgggaagattatggaattgggcgattttgca
gaagtcagtctgaccaaccgtgtgccttccggctattcactgcataacagcaaacgggct
gtgactcttgccataatcaagcacggtgaggagagcatggatgcaatgaacaaggctctc
gactcgaccataaaatatttctcagaccgctatcccgaaatagagttctccaaaacccga
agccagaccgagctgcttgacttcaccatctccaatcttgagcagaacctcatattgggc
cttttgctcgtgtttgtggtgtgtctcatcttcatgcgcagtgcgcgatcgtcattcatc
atcggattgagtataatagtcggagtaattcttacattcctgctcttctatctctttaac
gtgtcaatcaatatcatctctatggccggactgattcttgccgtcggcatgatgatcgac
aactccgtcatagtcactgaaaacatcacccagttccgtcatcgcggcaacgggcttatg
gatgcctgcgtcaaaggcaccgacgagatgataacgcccatgctgtcatcatcgcttaca
actgtagccgtgtttgtcccgctgatattcatgagcggtatcgccggagcgatattctct
gaccaggcattctcgatcacagccggtcttgcggcaagttatattgtcgggatcacattg
ctcccggtgctgtattatctttttgaaaataagaaatcggggataaaagagggaaaatca
gcagattcaaatcagaatcagtcaccagcctcccatcagtcttttatcagtctttatgac
cgcgggatggatttctgtttccggcataaatggacgttcatcgcctcgactttgctcaca
gtcccgctatgcgtcgtaatgttcatgcttatgcgtcaggagcgcatgcctgagatagac
agcaacgagacaatcgtccgcatcgactggaacgagaatatcaatcttgacacaaaccgc
agccgggtcgaggctctctcggattcagcatcagtcgaaagttcagcctatatcggcatg
caggattacatgctgtcatccgacttcgacctttcaacatctgaagccgagctttatttc
aaaacctccggacctgaagatatatcaccgcttcaaaatcgtattgccgaccgtatcaga
gacaaatatccgtctgcgacagtttcattccataaaactggcaatatctttgaaaaaatc
ttttcgtcagacgaggctgacatcgaagcgagaatcagcaaccggaataaagatgccggc
gagattgacagtcttgcatcactgtgcggacgcataggggaggcaactggtgagagcctg
tcaccggttccgttgcgccggcagattgacatatcggtcgaccgtacgcttctcgctatc
tacaatgtcgactactccgaggtgcagcgggcgttgtgcaccgcattcaagggcaacaca
gtgtcgacactccgctcctatcaggaatatactccgatagaaatatcagggcgtgaacag
agtgtcggcgagatacttggcaacgctttcgtcagatcgcgtgccgataaaaatggtgtc
cgtactgagattccacttcgctcgctcgtgacggtcggtcacagccgcgatctcaagacc
attacggccggcgtggccggcgaatatgtgcctataggtcttgaagtccccggtcgtgaa
gcgaaagtcatcgagaccatacgcgagacagtagctgctgacggctctcatgaagttgag
tttgccggcggttttttcagtaatgcccgcatgatgagagaactgacggtgatactcctt
gtgtcagtcatgctaatgtatttcattctctgtgcacagttcgagagtttcctccagcca
ctcatagtgttgcttgaaattccggtcgacacatttttcgcactgcttgccctcatgatt
ttcggacagacactcaatctcatgtcggccataggtataattgtgacgtgtggtatcgta
gtcaacgattcaatcctcaaactcgatgccatcaacgaactgcgcaagggaggcatgcct
ctgacagaggcaatacatacagcgggccgacgccgtctgcgcgccataatcatgacctcc
ttgaccaccgtcttcgccatgctccccgtgctttttacgtccgatatgggctctgaactt
cagcgcccgctcgccatagctatgatcggttcgatggtggtcggcactcttgtcagcatc
ttcgttattccgttgttttactggctaatctatcgcaaacatgaaaataagtaa
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