Duncaniella sp. B8: FDZ78_04175
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Entry
FDZ78_04175 CDS
T05963
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dun
Duncaniella sp. B8
Pathway
dun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FDZ78_04175 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dun03400
]
FDZ78_04175 (nth)
Enzymes [BR:
dun01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FDZ78_04175 (nth)
DNA repair and recombination proteins [BR:
dun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FDZ78_04175 (nth)
Prokaryotic type
FDZ78_04175 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QCP71817
UniProt:
A0AAE6BWC1
LinkDB
All DBs
Position
complement(891860..892498)
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AA seq
212 aa
AA seq
DB search
MTVKERYSKVLELFASAMPIAETELHYENPFQLLVAVILSAQCTDKRVNLITPALFEAYP
TPQALAAATQEEIFEYIRSCSYPNNKSRSLSGMARRLVEDFGGEVPSDLDSLTSLPGVGR
KTANVILSVIFDRPTMAVDTHVFRVSERIGLTTGSKTPLATEKALVKYIPEELIPKAHHW
LILHGRYVCKARRPDCLNCFLTSVCRFYSKNG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaaggaacgctattcaaaagtgctcgaactctttgcctcggcgatgcctatc
gccgagacagagttgcattatgaaaacccgtttcagctgcttgtggccgtgattctttcg
gctcagtgcaccgacaagcgggtcaacctgatcaccccggcgcttttcgaggcctatccg
acacctcaggccctggctgcggccacacaggaagagatattcgaatacatcagatcctgc
tcctatccaaacaacaagagccgttcgctcagcggtatggccaggcggcttgtcgaagat
ttcggcggcgaggtgccctcggatcttgactcgctaacaagtcttccgggagtagggcga
aagaccgccaatgtgatcctctcggtgattttcgaccgcccgacaatggcggttgacacc
cacgtgttccgcgtcagcgagcgcataggcctgaccaccggcagcaagactccgcttgcc
accgaaaaggctcttgtgaaatatatccctgaggaactgataccgaaggcccatcattgg
cttatacttcacggacgctacgtctgcaaagcacgtcgtccggactgtcttaactgtttt
ctgacatcagtctgtcgtttttattcaaaaaatggttga
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