KEGG   Nitratidesulfovibrio vulgaris DP4: Dvul_1526
Entry
Dvul_1526         CDS       T00452                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
dvl  Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03030  DNA replication
dvl03410  Base excision repair
dvl03420  Nucleotide excision repair
dvl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dvl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dvul_1526
   03410 Base excision repair
    Dvul_1526
   03420 Nucleotide excision repair
    Dvul_1526
   03430 Mismatch repair
    Dvul_1526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dvl03032]
    Dvul_1526
   03400 DNA repair and recombination proteins [BR:dvl03400]
    Dvul_1526
Enzymes [BR:dvl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Dvul_1526
DNA replication proteins [BR:dvl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Dvul_1526
DNA repair and recombination proteins [BR:dvl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Dvul_1526
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Dvul_1526
   MMR (mismatch excision repair)
    DNA ligase
     Dvul_1526
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Dvul_1526
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 DNA_ligase_ZBD HHH_5 BRCT Nlig-Ia HHH PTCB-BRCT DUF5788
Other DBs
NCBI-ProteinID: ABM28543
UniProt: A1VDM7
LinkDB
Position
complement(1813383..1815776)
AA seq 797 aa
MTEVKKGRVVDDAPVNDAPENDAAEVTSPARHDAIPEEARQRAAQLRADLERHNRLYYEL
DTPEISDAEYDVLYRELVGLERRWPALRDEASPTQRVGGEVLEGLEKQAHTLRMYSLDNA
FSRDEWGAFMQRMYNALPDAPSAFWCDPKMDGLALEVIYENGVFTSALTRGNGEVGEVVT
AAMRTVRNLPLALRGDDVPRRIEVRGEVVIAKADFEQLNARQSAAGGKLFANPRNAAAGS
VRQLDTTVTAGRPLQFLAYGVGQVVLEGGTAPWTTHSGLMARLREWGFDTPPEGRLCASP
DEVWAYYEALGARRESLAIEIDGVVAKLDDTEAQEALGFTARAPRWALALKFPAMQARTR
LDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATLHNEDEIRAKGLMLGDMVLVQRAGDV
IPEVVRPLVEERTGDERPFVFPENCPECDSPVVRPQGEVAHRCVNVMCPAVRRQSIIHFV
SKAGLDVRGVGERWVQQLVDGGHVTSPVGLFSLTKLDLMRFERMGPTSAANFVTALDAAR
TGATLVRLICALGIRHVGEQTARTLAANFTDLDALREADAETLQQLPDIGPEVAGSIRTF
FANEGNLELLERLRAIGLWPKRQDAPPAPEGADAIVRPLQGLKVLFTGSLTRVGRTEAED
MARAAGANIASSVTKSLDLLVVGGKPGSKLEKARKLGIRVMEEADFFAMLESAEMPAEGS
DAAEVPAPSVEDVDAKEVPSRDVAHVRIVHDGTASDPGGDSRSVAEDAPARSTEGDAVST
AEGEDVPRGRAEQLKLF
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgaccgaagtgaagaagggccgcgttgtcgacgatgcccctgtgaacgatgcccctgag
aacgatgccgcggaagtgacgtctcccgcccggcatgacgcgattcccgaagaggcccgc
cagcgcgccgcacaacttcgggcagaccttgagcggcataaccgcctctactacgaactt
gatacgcccgagataagcgacgccgaatacgacgtcctatatcgtgaactcgtgggcctt
gaaaggcgctggcccgcattgcgggacgaggcctcgcccacgcagagggtcggcggtgaa
gtgctcgaagggcttgagaaacaggcccacaccctgcgcatgtacagcctcgacaacgcc
ttctcccgcgacgaatggggggccttcatgcagcgcatgtacaacgcccttcctgacgcc
ccttcggccttctggtgcgaccccaagatggacggcctcgcgctggaggtcatctacgag
aatggcgtcttcacttcggcgttgacacggggcaacggtgaagtgggcgaggtcgtcacc
gccgctatgcggacggtgcgcaacctgccccttgccctgcgcggagacgacgtgccgcgc
cgtatcgaggtgcgcggcgaagtggtcatcgcaaaggccgacttcgaacaactcaacgcg
cggcaatctgccgccgggggcaagcttttcgccaacccgcgcaatgcggcggcggggtcg
gtgcgacaactcgatacaaccgtcaccgccggaaggcccttgcagtttctcgcctatggc
gtgggacaggtggtcctcgaaggcggcaccgcgccgtggacgacccatagcggcctcatg
gcaaggcttcgtgaatgggggttcgatacgccgccggagggccgtctgtgtgcttcgccg
gacgaggtgtgggcatactacgaggcgcttggcgcacgtcgagagtcgcttgccatcgag
atagacggggtcgtcgcgaagcttgatgacaccgaggcgcaggaagccctcggtttcacg
gcgcgtgccccacggtgggcactggccctcaagtttcctgcgatgcaggcgcgtacgcgt
ctcgatgacatccgtgtgcaagtggggcgcaccggggtgcttacaccggtggcgatactc
gaacccgtgcgcgtgggcggtgtagaggtctcgcgcgcaacgcttcacaacgaggacgag
attcgcgccaagggactgatgctgggcgacatggtgctggtacaacgcgctggcgatgtc
atccccgaggtggtgcgcccactggtcgaagaacgcactggtgacgaacggcccttcgtc
tttccggaaaactgtccggaatgcgatagccctgtggtcagaccccaaggcgaggtggcg
caccggtgcgtcaatgtcatgtgtcctgcggtgcgcaggcagtccatcatccatttcgtc
tccaaggcgggcctcgatgtgcgcggcgtgggtgaacgatgggtgcagcagcttgtggac
ggcgggcatgtgacctcacccgtcgggcttttctctctgaccaagctcgacctgatgcgt
ttcgagcgcatggggcctacttcggccgccaatttcgtcaccgcgctcgatgccgcccgc
acaggggcgacgcttgtccggctcatctgcgccctcggcatccgtcatgtgggtgaacag
acggcacgtacccttgccgcgaacttcaccgaccttgacgccctgcgtgaggccgacgcc
gagaccttgcagcagttgcccgacatcggccctgaagtggcaggttccattcgcaccttc
ttcgccaacgagggcaatctcgaactgcttgaacggttgcgtgccatcggcctctggccg
aaacggcaggatgctccgccggctccggagggcgctgacgccatcgtacgccccctgcaa
ggactgaaggtgctcttcaccggaagcctcacccgtgtgggacgcaccgaggccgaagat
atggcgcgggctgcgggggccaatatcgccagcagcgtcaccaagtctcttgaccttctt
gtcgtcggcggtaagcccggttcgaaactcgaaaaggcccgaaagcttggcatccgggtc
atggaagaggcggatttcttcgccatgctcgaatcggcggagatgcctgctgaaggctcc
gatgccgccgaagtgcctgctccctctgtggaagacgtggacgcaaaggaagttccttcc
cgggatgtggcccatgtccgcatagtccacgacggaacggcttccgacccgggtggtgac
tcgcgcagtgtggcggaggacgctcccgcccgttccacagagggggatgccgtgagcacc
gctgaaggtgaagacgtgccacggggcagggcagagcaactgaagctgttctga

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