Nitratidesulfovibrio vulgaris DP4: Dvul_1526
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Entry
Dvul_1526 CDS
T00452
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
dvl
Nitratidesulfovibrio vulgaris DP4
Pathway
dvl03030
DNA replication
dvl03410
Base excision repair
dvl03420
Nucleotide excision repair
dvl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Dvul_1526
03410 Base excision repair
Dvul_1526
03420 Nucleotide excision repair
Dvul_1526
03430 Mismatch repair
Dvul_1526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvl03032
]
Dvul_1526
03400 DNA repair and recombination proteins [BR:
dvl03400
]
Dvul_1526
Enzymes [BR:
dvl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Dvul_1526
DNA replication proteins [BR:
dvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Dvul_1526
DNA repair and recombination proteins [BR:
dvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Dvul_1526
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dvul_1526
MMR (mismatch excision repair)
DNA ligase
Dvul_1526
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Dvul_1526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
HHH_5
BRCT
Nlig-Ia
HHH
PTCB-BRCT
DUF5788
Motif
Other DBs
NCBI-ProteinID:
ABM28543
UniProt:
A1VDM7
LinkDB
All DBs
Position
complement(1813383..1815776)
Genome browser
AA seq
797 aa
AA seq
DB search
MTEVKKGRVVDDAPVNDAPENDAAEVTSPARHDAIPEEARQRAAQLRADLERHNRLYYEL
DTPEISDAEYDVLYRELVGLERRWPALRDEASPTQRVGGEVLEGLEKQAHTLRMYSLDNA
FSRDEWGAFMQRMYNALPDAPSAFWCDPKMDGLALEVIYENGVFTSALTRGNGEVGEVVT
AAMRTVRNLPLALRGDDVPRRIEVRGEVVIAKADFEQLNARQSAAGGKLFANPRNAAAGS
VRQLDTTVTAGRPLQFLAYGVGQVVLEGGTAPWTTHSGLMARLREWGFDTPPEGRLCASP
DEVWAYYEALGARRESLAIEIDGVVAKLDDTEAQEALGFTARAPRWALALKFPAMQARTR
LDDIRVQVGRTGVLTPVAILEPVRVGGVEVSRATLHNEDEIRAKGLMLGDMVLVQRAGDV
IPEVVRPLVEERTGDERPFVFPENCPECDSPVVRPQGEVAHRCVNVMCPAVRRQSIIHFV
SKAGLDVRGVGERWVQQLVDGGHVTSPVGLFSLTKLDLMRFERMGPTSAANFVTALDAAR
TGATLVRLICALGIRHVGEQTARTLAANFTDLDALREADAETLQQLPDIGPEVAGSIRTF
FANEGNLELLERLRAIGLWPKRQDAPPAPEGADAIVRPLQGLKVLFTGSLTRVGRTEAED
MARAAGANIASSVTKSLDLLVVGGKPGSKLEKARKLGIRVMEEADFFAMLESAEMPAEGS
DAAEVPAPSVEDVDAKEVPSRDVAHVRIVHDGTASDPGGDSRSVAEDAPARSTEGDAVST
AEGEDVPRGRAEQLKLF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagtgaagaagggccgcgttgtcgacgatgcccctgtgaacgatgcccctgag
aacgatgccgcggaagtgacgtctcccgcccggcatgacgcgattcccgaagaggcccgc
cagcgcgccgcacaacttcgggcagaccttgagcggcataaccgcctctactacgaactt
gatacgcccgagataagcgacgccgaatacgacgtcctatatcgtgaactcgtgggcctt
gaaaggcgctggcccgcattgcgggacgaggcctcgcccacgcagagggtcggcggtgaa
gtgctcgaagggcttgagaaacaggcccacaccctgcgcatgtacagcctcgacaacgcc
ttctcccgcgacgaatggggggccttcatgcagcgcatgtacaacgcccttcctgacgcc
ccttcggccttctggtgcgaccccaagatggacggcctcgcgctggaggtcatctacgag
aatggcgtcttcacttcggcgttgacacggggcaacggtgaagtgggcgaggtcgtcacc
gccgctatgcggacggtgcgcaacctgccccttgccctgcgcggagacgacgtgccgcgc
cgtatcgaggtgcgcggcgaagtggtcatcgcaaaggccgacttcgaacaactcaacgcg
cggcaatctgccgccgggggcaagcttttcgccaacccgcgcaatgcggcggcggggtcg
gtgcgacaactcgatacaaccgtcaccgccggaaggcccttgcagtttctcgcctatggc
gtgggacaggtggtcctcgaaggcggcaccgcgccgtggacgacccatagcggcctcatg
gcaaggcttcgtgaatgggggttcgatacgccgccggagggccgtctgtgtgcttcgccg
gacgaggtgtgggcatactacgaggcgcttggcgcacgtcgagagtcgcttgccatcgag
atagacggggtcgtcgcgaagcttgatgacaccgaggcgcaggaagccctcggtttcacg
gcgcgtgccccacggtgggcactggccctcaagtttcctgcgatgcaggcgcgtacgcgt
ctcgatgacatccgtgtgcaagtggggcgcaccggggtgcttacaccggtggcgatactc
gaacccgtgcgcgtgggcggtgtagaggtctcgcgcgcaacgcttcacaacgaggacgag
attcgcgccaagggactgatgctgggcgacatggtgctggtacaacgcgctggcgatgtc
atccccgaggtggtgcgcccactggtcgaagaacgcactggtgacgaacggcccttcgtc
tttccggaaaactgtccggaatgcgatagccctgtggtcagaccccaaggcgaggtggcg
caccggtgcgtcaatgtcatgtgtcctgcggtgcgcaggcagtccatcatccatttcgtc
tccaaggcgggcctcgatgtgcgcggcgtgggtgaacgatgggtgcagcagcttgtggac
ggcgggcatgtgacctcacccgtcgggcttttctctctgaccaagctcgacctgatgcgt
ttcgagcgcatggggcctacttcggccgccaatttcgtcaccgcgctcgatgccgcccgc
acaggggcgacgcttgtccggctcatctgcgccctcggcatccgtcatgtgggtgaacag
acggcacgtacccttgccgcgaacttcaccgaccttgacgccctgcgtgaggccgacgcc
gagaccttgcagcagttgcccgacatcggccctgaagtggcaggttccattcgcaccttc
ttcgccaacgagggcaatctcgaactgcttgaacggttgcgtgccatcggcctctggccg
aaacggcaggatgctccgccggctccggagggcgctgacgccatcgtacgccccctgcaa
ggactgaaggtgctcttcaccggaagcctcacccgtgtgggacgcaccgaggccgaagat
atggcgcgggctgcgggggccaatatcgccagcagcgtcaccaagtctcttgaccttctt
gtcgtcggcggtaagcccggttcgaaactcgaaaaggcccgaaagcttggcatccgggtc
atggaagaggcggatttcttcgccatgctcgaatcggcggagatgcctgctgaaggctcc
gatgccgccgaagtgcctgctccctctgtggaagacgtggacgcaaaggaagttccttcc
cgggatgtggcccatgtccgcatagtccacgacggaacggcttccgacccgggtggtgac
tcgcgcagtgtggcggaggacgctcccgcccgttccacagagggggatgccgtgagcacc
gctgaaggtgaagacgtgccacggggcagggcagagcaactgaagctgttctga
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