KEGG   Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0476
Entry
DvMF_0476         CDS       T00816                                 
Name
(GenBank) homocysteine S-methyltransferase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
dvm  Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00270  Cysteine and methionine metabolism
dvm00450  Selenocompound metabolism
dvm00670  One carbon pool by folate
dvm01100  Metabolic pathways
dvm01110  Biosynthesis of secondary metabolites
dvm01230  Biosynthesis of amino acids
dvm04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:dvm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    DvMF_0476
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    DvMF_0476
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    DvMF_0476
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    DvMF_0476
   04980 Cobalamin transport and metabolism
    DvMF_0476
Enzymes [BR:dvm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     DvMF_0476
SSDB
Motif
Pfam: S-methyl_trans B12-binding Pterin_bind B12-binding_2 DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: ACL07433
UniProt: B8DKK4
LinkDB
Position
complement(557642..560098)
AA seq 818 aa
MPDFRQALRSGRRLVFDGGMGTMLQSRGLPPGVSPELFCLARPDVLVGIHADYLRAGADV
LTTNTFGGCIHKLGTGPGAPDVVEFNRAMARAAREAVLASGREAFVAGSVGPSGHFMRPL
GDLDPAELVAAFRAQIRGLVQGGVDLILAETQFDLAEARAIVLAARAECDLPVGVSMTFE
NGVSLTGTRPEVFVQSMLNMGVDLVGTNCSAGPEQMAEVADELLAISEVPVLVEPNAGLP
ELVDGKTVFRLGPDDFARHTARFAASGVRMLGGCCGTTPDHIAALRGALDNLSGGLVPDP
ARRDGIVLTTRAQAVHIGAGSPIRIIGERINPTGKKLLTAELQAGEFAQALRFADEQVEA
GAPLLDVNVGAPMVDEAVLLPALVERLVARHSLPLSLDSSNADAIAAALPFHPGSPLVNS
ISGEPGRMEHLGPLCRDHGAPFILLPLKGRKLPVTAAERIAIIEELLQQADSLRIPRRLV
MVDVLALAVSSKAEAARHCLDTIRWCAAQGLPTTIGLSNISFGLPARELLNSTFLAMAAG
AGLSSCIAHPGNARIREAVAASSVLLGLDANAESFIEGYSGWTPGGDATGATPAGVAGGT
GGGTGGVKAKAATLEEAVIRGDREGALALVERALSEGADPFSLVQEKLIPGITEVGRRYE
RREYFLPQLIRSAETMQHAFRKLQPLLEAQRGHEARPVIIMATVEGDIHDIGKNIVTLML
GNHGFDVVDLGKDVKAADIVEAAERHGARVIGLSALMTTTMVRMEDTVRLVRERGLPVKV
MVGGAVVTPAYAEAIGADGYSADAVEAVRVAKELLTVQ
NT seq 2457 nt   +upstreamnt  +downstreamnt
gtgccagattttcgtcaagcgcttcggtcaggtcgtcggctggtcttcgatggcggcatg
ggtaccatgctccagtcgcgcgggttgccgcccggcgtaagcccggaactgttctgcctg
gcccggcccgacgtgctggtgggcattcatgccgactacctgcgggccggggccgacgtg
ctgaccaccaacacctttggcggctgcatccataaattgggcacgggccccggcgctccc
gacgtggtggagttcaaccgggccatggcccgcgccgcgcgcgaggcggtgcttgccagc
ggccgcgaggccttcgtggcgggcagcgtggggccgtccggccacttcatgcgcccgctg
ggtgatctggaccccgccgaactggtggccgccttccgcgcccagatccgggggctggtg
cagggcggggtggacctgattctggccgagacccagttcgacctggcggaggcacgggcc
atagtgctggccgcgcgcgccgagtgcgacctgcccgtgggcgtttccatgaccttcgag
aacggcgtcagccttaccggcacgcggcccgaagtgttcgtgcagtccatgctcaacatg
ggcgtggaccttgtgggcaccaattgcagcgccgggccggagcagatggcagaggtggcg
gatgaactgctggccatctccgaagtgcctgtgctggtggaacccaacgcaggcctgccg
gaactggtggacggcaagaccgtgttccgcctggggccggacgacttcgcccggcacacc
gcgcgctttgccgcgtccggcgtgcgcatgctgggcggctgctgcggcaccacgcccgac
cacatcgccgccctgcgcggcgcactggacaacctttccggtggccttgttcccgatccg
gcccggcgcgacggcatcgtcctgaccactcgcgcccaggccgtgcacatcggggcgggc
agcccaatccgcatcatcggcgaacgcatcaaccccaccggcaagaagctgctgacggcg
gaactgcaggcgggcgaattcgcccaggcactgcgctttgccgacgaacaggtggaggcg
ggcgcgccgctgctggacgtgaacgtgggcgcgcccatggtggacgaggcggtgctgctg
cccgcgctggtggaacgcctggtggcccgccattcgctgccgctgtcgctggattcgtcc
aatgccgacgccattgccgcggccctgccgtttcatcccggctcgccgctggtcaactcc
ataagcggcgaaccgggccgcatggagcacctggggccgctgtgccgcgaccacggcgcg
ccgttcatcctgctgccgctcaaggggcgcaagctgccggtgacggcggcggaacgcatt
gccatcatagaggaactgctgcaacaggccgacagcctgcgcattccgcgccgtctggtc
atggtggacgtactggccctggccgtgtcgtccaaggcagaggccgcgcgccactgtctg
gataccatccgctggtgcgcggcgcaggggctgcccaccaccatcgggctgtccaacatc
tcgttcggcctgcccgcgcgcgaactgctgaactccacatttctggccatggcggcgggc
gcggggctttcctcgtgcatcgcccatcccggcaacgcgcgcatccgcgaggcggtggcc
gcctccagcgtgctgctggggctggacgccaacgccgagtcgttcatcgaaggctattcc
ggctggacgccgggcggtgacgccaccggcgccacgcccgctggcgtggctggcggcacg
ggcgggggcacgggcggcgtgaaggccaaggccgccaccctggaagaggccgtcatccgg
ggtgaccgcgagggcgcgctggccctggtggaacgcgccctgtccgaaggggccgacccg
ttctcgctggtgcaggaaaagctgatccccggcatcaccgaggtgggccgccgctacgag
cggcgcgaatactttctgccgcagctcatccgctcggcagagaccatgcagcatgccttc
cgcaaacttcaaccgttgcttgaagctcagcgggggcatgaagcccgcccggtgatcatc
atggccacggtggagggcgacatccacgacatcggcaagaatatcgtcaccctgatgctg
ggcaaccacggcttcgacgtggtggacctgggcaaggacgtgaaggccgccgacatcgtg
gaggccgcggaacgccacggcgcgcgggtgatcggtctttcggccctgatgaccaccacc
atggtgcgcatggaagacaccgtgcgcctggtgcgcgagcgcggcctgcccgtcaaggtc
atggtgggcggggcggtggttacgcccgcctacgccgaggccatcggcgcggacggctat
tccgccgacgccgtggaggccgtgcgggtggccaaggaactgctgacggtgcagtag

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