Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_0960
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Entry
DvMF_0960 CDS
T00816
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
Pathway
dvm00300
Lysine biosynthesis
dvm00550
Peptidoglycan biosynthesis
dvm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dvm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DvMF_0960
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DvMF_0960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dvm01011
]
DvMF_0960
Enzymes [BR:
dvm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
DvMF_0960
Peptidoglycan biosynthesis and degradation proteins [BR:
dvm01011
]
Precursor biosynthesis
Amino acid ligase
DvMF_0960
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ACL07915
UniProt:
B8DP83
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All DBs
Position
complement(1164827..1166311)
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AA seq
494 aa
AA seq
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MTRISFDGLLARVRENTPEIRTDSRKVGRGDVFVAVPGVAANGGAGVDGADFIVKAWAAG
AGAVVCLPARVEAALADAPEGAVVAAHDDPRVAIGLLGQARYGTDALPFPVVAVTGTNGK
TTITYLLDHVFSALGRRAGVLGTVSYRWPGFAMDAPLTTPDCIETHAMLGRMRDAGVDVA
LMEVSSHALDQRRVAGIRFAGAILTNLTQDHLDYHGDMEHYYAAKARLFTELPDADKACA
VNADDAWGRRLLGEVPHAIGFGLDAGNAVSGRRFLHGEMVRNATSGLTLRMTYEGRQWEL
SSHLVGAHNASNLLAVQAVCLGMGLAPQDFASLAGFTGVPGRLERIVNPRGLDIFVDYAH
TPDALENVLRALRAVGFSRIVTVFGCGGNRDRTKRPLMGQAVARHADVAVLTSDNPRHED
PEAIMADVLPGLAGARKVVSDADRARAIGKALALLQPGDVLLVAGKGHESYQQIGDRKVP
YSDQQVIREILGCN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtatatcttttgatggccttctggcccgtgttcgtgaaaacacgccggaaatc
cgcaccgactcgcgcaaggtgggccggggcgacgtgttcgtggccgtgcccggcgttgcc
gccaacggcggcgcgggcgttgacggcgcggatttcattgtgaaggcatgggccgccggg
gccggagcggtggtctgcctgcccgccagggtggaggcagcccttgccgatgcccccgag
ggtgcggtggtggccgcccacgacgacccgcgcgtggccatcggcctgctgggccaggcc
cgctacggcacggatgcgctgccctttccggtggtggccgttaccggcaccaacggcaag
accaccatcacctacctgctggaccacgtgttttccgcccttggccgccgggccggggtg
ctgggcaccgtcagctaccgctggccgggctttgccatggacgcgccgctgaccacgccc
gactgcatcgaaacccacgccatgctgggccgcatgcgcgacgccggggtggacgtggcg
ctgatggaggtttcgtcgcacgcgctggaccagcgccgggtggcgggcatccgctttgcc
ggggccatcctgaccaacctgacgcaggaccacctggactaccacggcgacatggaacac
tactatgccgccaaggcccgcctgttcaccgaactgcccgacgcggacaaggcctgcgcc
gtcaatgccgacgacgcctggggccgccgcctgctgggcgaggtgccgcacgccatcggc
ttcgggctggatgctggcaatgccgtttcgggccgtcggttcctgcacggcgagatggtg
cgcaacgccacctcgggcctcacgctgcgcatgacttatgaagggcggcagtgggagctt
tcctcgcaccttgtgggcgcgcacaacgcctccaatctgctggcggtgcaggcggtttgc
ctgggcatgggccttgcgccgcaggatttcgccagcctggccggcttcaccggcgtgccg
ggacggctggagcgcatcgtgaacccgcgggggctggacattttcgtcgattacgcacat
acccccgacgcgctcgaaaacgtgctgcgcgcgctgcgcgcagtgggcttttcgcgcatc
gtcaccgtgttcggctgcggcggcaaccgcgaccgcaccaagcgcccgctgatggggcag
gcggtggcgcgccatgccgacgtggcggtgctcacgtccgacaacccccgccacgaggac
ccggaggccatcatggccgacgtgctgcccggccttgccggggcgcgcaaggtggtcagc
gacgccgaccgggcccgggccatcggcaaggccctggcgctgttgcaaccgggcgacgtg
ttgctggtggcgggcaaggggcacgaaagttaccagcagatcggcgaccgcaaggtgccg
tacagcgaccagcaggtcattcgggagatactggggtgcaattga
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