Defluviicoccus vanus: HQ394_14250
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Entry
HQ394_14250 CDS
T06814
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dvn
Defluviicoccus vanus
Pathway
dvn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HQ394_14250 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvn03400
]
HQ394_14250 (nth)
Enzymes [BR:
dvn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HQ394_14250 (nth)
DNA repair and recombination proteins [BR:
dvn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HQ394_14250 (nth)
Prokaryotic type
HQ394_14250 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QNT70278
UniProt:
A0A7H1N3J2
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All DBs
Position
3111023..3111679
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AA seq
218 aa
AA seq
DB search
MTPAAIDAFYARLAAANPQPKSELSYQNAFTLLVAVVLSAQATDAGVNRATSGLFAVADT
PAKMLALGEESLRQRIKTIGLFNTKAKNIIALSQLLQDRHGGQVPCDREALQALPGVGRK
TANVVLNVAFGVPTIAVDTHVFRVANRTGLAPGKTPEQVEARLLARTPPAWLPHAHHWLI
LHGRYVCKARKPDCSVCPVASLCLFEGKTAGPMLAVEC
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgactcccgcggcaatcgatgccttctacgcccggctggccgcggccaatccgcaaccg
aaaagcgagctgagctaccagaacgcgtttacgcttctcgttgccgtcgtgctctcggcg
caggcgaccgacgccggtgtcaaccgggccacctccggcctatttgccgttgccgatacg
ccggcgaagatgctggcgctgggcgaagagagcctgcgccagcggatcaagaccatcggc
ctgttcaacaccaaggcgaagaatatcatcgccctcagccagctgctgcaggatcggcac
ggcggtcaggtgccatgcgaccgtgaggcgctgcaggcattgccgggtgtcggccggaag
acggccaacgttgtcctcaacgtcgcctttggtgtgccgacgatcgccgtcgatacgcat
gtctttcgcgtcgccaaccgcaccggccttgccccgggcaagacaccggagcaggtggag
gcacgactgctggcgcgcacaccacctgcctggttgccgcatgcccaccattggctgatc
ctgcatggccgctacgtctgcaaggcacgcaagcccgactgttcggtatgtccggtcgca
tccctctgcctgttcgagggcaaaacggccggccccatgttagccgttgaatgctga
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