Diabrotica virgifera virgifera (western corn rootworm): 114326188
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Entry
114326188 CDS
T09922
Name
(RefSeq) telomerase-binding protein EST1A-like isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114326188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114326188
03032 DNA replication proteins [BR:
dvv03032
]
114326188
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114326188
mRNA cycle factors
Common to processing body (P body) and stress granule
114326188
DNA replication proteins [BR:
dvv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
114326188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
HtdO
Motif
Other DBs
NCBI-GeneID:
114326188
NCBI-ProteinID:
XP_028130256
UniProt:
A0ABM5ID76
A0A6P7F4B5
LinkDB
All DBs
Position
4:250880273..251293085
Genome browser
AA seq
1703 aa
AA seq
DB search
MRRGKPHQPIYRPGSGPLKKSGNVEETESDSSVLYNPRHNQFENTHVDSSKFRSEGSSQG
DRLRDFNRVTSELGDLSLNHEVTKRPKKPDQIRYVPRPIAQQAREQNQSQDMNRNTFAHA
NGVEKTSDASDTVGHKRMPYSERNQMDQRNNWRHESARQKQMGEGRGVNNGSANSNWNRS
RDTRSVEPSGPPSRNYNEKIQSKPPSGRRHSLVGMDQFNNLPPRLQKKYLEENKIKIPPQ
PPTEENHWDGSSVTFQKNPNYSQMGGAYYTLPMSPASHHHQNLRFGSNTLPGKPRGRGRL
NYEQEMPPPGTPFDSMTPDRVRSPASSRPCSPPSVRSPQSRPLTPVNDYSDNRRGQRRQD
DMGNKGQDRRDNQRREYGHRRDGKNFPRERDNFNNRENFNRDRDNNRDGYREHYNQRWED
DYREPRQKDRNRDGHNRENHNRDNYNRRDRDPRDPRDNRDNRDNRNNRDHRDVRDNRDNR
EYRDNREYRDNRDHRRGGGGGHRDRRRDHRRDRDRRSSSKDNYTQPAPSVAPEESWDDPP
SIQPAHSIAEVQPQSQARPEQLDFHISSEAINSLIPSMISSTLDWSEEVELQDRLESEYL
SDALTRSSSIVSLQEVGGMKSLPVNLNEQPASASKSRRRNRRRSKNRSRVRDGSTSQTRN
TNRTRQNSTTSIDSTYDSFKVPRDPYPGSSRRSSRDTRDTSYDRYHSSSRNASRDSSWDR
HPQSKGSISGNWREDMERSRKNSDKEGKPTMEDIKNVDANTKKAGVIVLPSQKQEVNPNA
APTLSIEDHPRYPEARKSPGQQKSLYDPNNPTKPILVKSSSVRVSVPGFSDNAESSPPQM
YTTDQFGNLRPPWYDENTESFKTCHYPDLLRDIKRADNELQYVVDKGLLLMHWDQVDKLR
SFMKEALEYLICKAIKFCQTEKVEQHFWNILYHNIIEVTRKAIKNDPDNKEKYKGFLLYL
IDEGTKYFEKLLSVLEETFDFKLNNFLKDNNMASHKGLGLVGMALISAQKLFLFLGDLGR
YREEVNETSNYGKCRQWYIKSHEINPKNGKPYNQLAILAVYARRKLDAVYYYMRSLMSSN
PAPSARENLISLFEENRKKYEQGEKKRREERLERQRLQMKQKESEDASIAPGSLRKETWI
HPEGRRKVYRTSQANIEQNYSDEEDLSALSSVEVNKRFIVSYLHVQGKLITKIGLESFQE
TAMQMLKEFRALLQHSPVPIPCNRLLQLLALNMYAIDTTQLKDPQLQCQPGYRSELQERA
LIVSLQMFNLILERCVSTLQDYISSHNDFSHISFPPDANVLLPAVKIWCDWLLCHTGVWN
PPPSTQDFKVGSPGDCWSRLATLMNLLEQMDQSQAVSFAKEPQEGCDQVRLPEDSVLSGF
TPLLYTADDAVYVKKDIDLESAHFTQRLNKLLFFGTVYLCGVDPPVLKLEIEDEVREYVS
VVCTSNSRDSPPNTELRPNNDVLLESFSDNEEEQLDQTITPGASSEVRDLLTRKVELEKR
KRSQELHMQRVKKILSQSVVSVHVEVRPKYLVPDTNCFIDHMNGISAIAESHSYTLMVPI
VVLSELEGLSRGGKGPAPDSRSALDPQHVKRVADCAREALEFLKNRHASVKCVTTKGAIL
PSTNFSTEDDTMWDNSFKNDDKILTTCLGLCKGNAQEVSEGEPRNLVREVVLLTEDRNLR
VKAYARDVPVRELPDFMRWAGLG
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtggaaaacctcatcaaccaatttacagaccaggaagtggccctttaaagaaa
tcgggtaacgtagaggaaacagaatcagattccagtgttttatataatcccagacataat
cagtttgaaaatacgcacgtagatagttccaaatttagaagtgaaggtagttcacaagga
gatagacttagggattttaacagggttacttcagaattaggggatctttctcttaatcat
gaagtaactaaacgcccaaaaaaacctgaccaaattcgctacgtgcctagacctattgct
caacaagctagagaacaaaatcagtcacaagacatgaaccgaaacacatttgctcatgcg
aatggcgtcgaaaaaacatccgatgccagtgatacagtaggtcataagagaatgccatat
tctgaacggaaccagatggatcagagaaacaactggaggcacgaatctgccaggcagaaa
cagatgggagaaggcagaggagtgaacaatggttccgccaactccaactggaaccggtca
cgcgacacccgcagcgtcgaaccttccgggcctccaagtcgcaactacaacgaaaaaatc
cagtcaaagccacctagtggcagaagacatagtttagtcggaatggatcaatttaataac
ctgcctccaaggttgcaaaagaaatatttagaagagaataaaatcaaaataccacctcag
ccaccgacggaagaaaatcattgggacggaagtagcgtcacttttcagaaaaatccaaat
tattctcaaatggggggagcttactatacactgcccatgtcgccagcttcccatcaccat
caaaacctgcgtttcggatcaaacacgctacctggtaaaccgagaggcaggggaaggctg
aattacgaacaagaaatgcccccaccaggaacgccatttgactcaatgacaccagataga
gttagaagtccagccagctcgcgaccttgttcaccaccgtccgtcagaagtccccagagt
agacccttgactccagtcaatgattattcagacaacagacgaggacaaaggagacaagat
gatatggggaataagggacaggatcgaagagataatcaaagaagagaatatggtcataga
agggatggcaaaaatttccccagagaaagagacaattttaacaatagggaaaacttcaat
agggatagagacaataatagagacggttatagagagcattacaatcaaaggtgggaagac
gattatagggaaccacgccaaaaagatcgaaaccgagatggacacaatagagaaaaccac
aatagggacaattacaatcgaagagatcgagacccgagagatcctagagacaacagggac
aatagagataacagaaataatagagatcatagggacgttagagacaatagggataatagg
gaatacagagataatagggaatacagagataacagagaccacagaagaggtggaggtggc
ggccacagggatagacgaagagaccatcgtagggacagagacagaagaagtagcagtaaa
gataactatacccagcccgctcccagcgtagctcctgaagaaagctgggacgatccacca
agcatacaaccagcgcattcgattgccgaagtgcagcctcaaagtcaagcccgtccagaa
caactagattttcacattagctccgaggctatcaatagtttgattcccagcatgatatct
tcaactttggattggagtgaagaggtggagctgcaagatcgactagaatctgaatatttg
agtgacgctcttacgagaagttcttcgatagtcagtctgcaagaagtaggaggcatgaaa
tctttgcctgtaaaccttaacgaacagccagcttcagcaagcaaatctagaaggcgaaat
aggagaagaagcaaaaacagaagtcgcgttcgtgacggcagcacctcccaaactcggaac
acgaatcgtaccagacagaactcaactacgagcatagacagtacctacgatagcttcaaa
gtacctcgagatccataccctggttcgtcaaggagaagttcccgggatactagggacacg
agttacgacaggtaccacagcagttcgaggaatgccagtcgggatagtagttgggatcgt
caccctcaaagcaaaggatctatcagtggcaattggcgtgaagacatggaaagaagtaga
aaaaatagcgacaaagaaggcaaacctaccatggaagatataaaaaatgtcgatgcgaat
accaaaaaagctggagtgatagtgctaccttcccaaaagcaggaagtcaatccaaatgca
gcacctacccttagtattgaagaccatccaaggtatcctgaagcacgaaaatctccaggt
caacaaaaaagcctctacgatcccaacaatcccacaaaaccgatcctagtaaaatcctcc
agtgtcagagtcagcgtacccggattttccgacaatgcagaatcatctccaccacaaatg
tacactacagatcaattcggaaacctgaggcctccgtggtatgacgaaaacacggaatcg
ttcaagacttgccactatcctgacctgttgagggacatcaaaagggctgacaacgaactg
cagtacgtcgttgataagggactgcttttaatgcactgggaccaggtggacaaattgcga
agtttcatgaaggaagcactggaatacctcatctgcaaagccattaagttctgtcaaact
gaaaaggtcgagcaacatttttggaatattctttatcacaacattatcgaagttactagg
aaagcaatcaaaaacgatcccgacaataaggaaaaatataaaggttttttactatatcta
atagacgaaggtaccaaatatttcgagaagcttctttctgttctcgaggaaacattcgat
ttcaaactcaacaacttcttgaaagacaacaatatggcgtcccacaaaggtctaggtctt
gtgggcatggctctgatatccgcccagaaattgtttctgttcttgggagacctgggaagg
tatagagaagaggtgaacgagacttcaaactatggaaaatgtagacagtggtatatcaaa
tctcacgagatcaatccaaagaacggcaaaccttacaatcaactggctatattggccgtt
tatgctagaagaaaattagatgctgtatattactacatgagaagtctgatgtcttcaaat
cctgcaccttctgctagagaaaacctcatatcattattcgaagaaaataggaaaaagtac
gaacaaggcgagaagaaacgaagagaagaaaggctggaacgtcaacgcctacaaatgaaa
caaaaagaatccgaagatgccagtatcgcacctggctctcttagaaaagaaacttggata
cacccggaaggtagaagaaaagtgtacaggaccagtcaggcgaacatcgaacaaaattat
tcggatgaagaggatttatctgctttgagtagtgtcgaggtaaataaacgatttatcgtg
agctatctacatgtacagggaaagctcatcacaaaaatcggtttggagagttttcaagag
acggcgatgcagatgttgaaagaattcagggctcttttgcaacattctccagtccccatc
ccttgtaacaggctcctccaattgctggcccttaatatgtacgccatcgatactactcag
ctgaaggatccccagttgcaatgccagcctggctacagatcggagctccaggagcgcgcc
ttgatagtgtccttgcaaatgttcaatcttatccttgaacgatgcgttagtactttacaa
gattacatatcatcccataacgacttttcccatatctccttccctccagacgccaatgtc
cttcttcccgccgtcaaaatttggtgcgattggttgttgtgccacacaggagtgtggaac
ccgcctccgtcgacacaggattttaaagtgggatctcccggtgattgttggagcaggttg
gcaactttgatgaatttgttggagcagatggatcaaagtcaggcagtgagtttcgctaaa
gagccacaagaaggctgcgaccaagttcgtcttccagaagacagcgtcttaagcggcttc
actccccttctctataccgcagatgacgcagtctacgtcaagaaagacatcgatttggaa
tctgcccacttcacccaacgccttaataaactgcttttctttggaacggtctacctttgc
ggcgtcgatcctccagtgttaaaattagaaatagaagacgaagtcagggagtacgtttcg
gtcgtgtgtacgagtaatagtagggattcaccgccaaacacggagttgaggccgaacaac
gatgtgctactggagagcttcagcgacaacgaagaagagcagctggatcagacgattaca
ccgggtgcctccagcgaagtgcgagacttgctgacccgaaaggttgaattagagaagagg
aagaggagtcaagaactacatatgcaacgagtcaagaaaattcttagccagtcagtagtg
agtgttcacgtggaagtaaggccgaaatacctagtcccagacaccaattgttttatcgat
cacatgaatggtatcagtgccattgcagaatcccattcctatacgcttatggttcctata
gttgttctaagtgaattagaaggtctctcgagaggcggcaaaggccccgccccggactca
cgtagcgctttggatccgcagcacgtgaagagagtagcagattgcgccagagaagcctta
gaattcctcaagaatagacacgcctcagtgaaatgcgtcacgaccaaaggcgctatcctt
ccgtccacgaatttttccacagaagatgacacgatgtgggacaatagttttaagaacgac
gataagattttaactacgtgtttaggtttatgtaaggggaatgcacaggaggtttctgag
ggggaaccccgcaatcttgtgcgggaggtggtacttctgacggaagacagaaacctgagg
gtgaaagcctatgcgcgagacgttcccgttagggaactgcccgatttcatgcgttgggcc
ggactgggatga
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integrated database retrieval system
