Diabrotica virgifera virgifera (western corn rootworm): 114329048
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Entry
114329048 CDS
T09922
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03018
RNA degradation
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114329048
09123 Folding, sorting and degradation
03018 RNA degradation
114329048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
114329048
03041 Spliceosome [BR:
dvv03041
]
114329048
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114329048
mRNA degradation factors
5'-3' decay
Lsm complex
114329048
Spliceosome [BR:
dvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114329048
Complex C
U2 snRNP components
114329048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
RimP_C
LNS2
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
114329048
NCBI-ProteinID:
XP_028133861
UniProt:
A0A6P7FDU7
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Position
7:complement(196994335..196996810)
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AA seq
101 aa
AA seq
DB search
MADDLENIPSITVKEPLDLVRLSLDERIYVKMRNDRELRGRLHAYDQHMNMILSDAEETI
TTVEIDEETYEEVYRTTKRNIPMLFVRGDGVILVSPPMRTS
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatttagaaaatattccgtctataacagtaaaagaacccttggacttggtg
agactaagtttagatgaaagaatatatgtaaaaatgcgaaatgatcgtgaacttcgcggc
agattgcatgcttatgatcaacatatgaacatgattttaagtgatgctgaagaaacgatt
actacagtagaaatagatgaggagacatatgaagaagtttacagaactacaaagagaaat
attcccatgctttttgtaaggggagacggggtcattttagtgtctccaccaatgcgaaca
tcctaa
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