Desulfosarcina widdelii: DSCW_09970
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Entry
DSCW_09970 CDS
T06303
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00020
Citrate cycle (TCA cycle)
dwd00270
Cysteine and methionine metabolism
dwd00620
Pyruvate metabolism
dwd00630
Glyoxylate and dicarboxylate metabolism
dwd00680
Methane metabolism
dwd00710
Carbon fixation by Calvin cycle
dwd00720
Other carbon fixation pathways
dwd01100
Metabolic pathways
dwd01110
Biosynthesis of secondary metabolites
dwd01120
Microbial metabolism in diverse environments
dwd01200
Carbon metabolism
Module
dwd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
dwd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dwd_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DSCW_09970 (mdh)
00620 Pyruvate metabolism
DSCW_09970 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
DSCW_09970 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
DSCW_09970 (mdh)
00720 Other carbon fixation pathways
DSCW_09970 (mdh)
00680 Methane metabolism
DSCW_09970 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
DSCW_09970 (mdh)
Enzymes [BR:
dwd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
DSCW_09970 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
UDPG_MGDP_dh_N
DAO
3HCDH_N
NAD_binding_7
NAD_binding_8
TrkA_N
Shikimate_DH
Pyr_redox_2
Glyco_hydro_4
ApbA
ELFV_dehydrog
Thi4
ThiF
Motif
Other DBs
NCBI-ProteinID:
BBO73580
UniProt:
A0A5K7YYW5
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All DBs
Position
1027493..1028425
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AA seq
310 aa
AA seq
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MDKKVTVVGAGNVGATAAQRLAEKELCDVVLVDIVEGVPQGKALDLTEAAPIEKHDAHLT
GSNGYEETAGSDIVIITAGIPRKPGMSRDDLISTNAGIIKSVTEQIAKYSPNAVLIIVSN
PLDAMCHVAFEASGFPKNRVIGMAGVLDSARFRAFIAMELDVSVENTHAFVLGGHGDTMV
PLPRYSTVAGIPITELISKERIAELVDRTANGGAEIVGLLKTGSAYYAPASAAVEMAESI
LKDKKKVLPCAAYLQGEYGINDLYIGVPVKLGKNGVEQVIEITLTEEEKTALMKSAAAVQ
GLKDDLAKLG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaaagtgaccgtagtcggtgccggaaacgtgggtgctaccgctgcccagcga
ctggccgaaaaagagctatgcgacgtcgtgttggtggacatcgtcgaaggggttccccag
ggcaaagccctcgacctgaccgaagccgcacccattgaaaagcacgatgcccacctgacc
ggaagcaacggttacgaagagaccgccggatcggacatcgtcattatcacagccgggatt
ccccgtaaaccgggtatgagccgggacgacctgatcagcaccaatgcaggcatcatcaaa
agcgtaaccgagcagatcgccaaatattcgccgaatgccgttctgatcatcgtcagcaat
ccgctggatgccatgtgccatgtggccttcgaagcctccggttttccgaagaaccgggtg
atcggcatggcgggcgttctggattcggcccgcttcagggcattcatcgccatggaactg
gatgtttccgtagaaaacacccatgctttcgttctgggcggacacggcgacaccatggtt
cccctgccccgctactccacggttgccggaattcccattaccgagttgatctccaaggag
cgcatcgctgaactggtggatcgcacggccaacggcggggctgaaatcgtcggcctgctg
aagaccggaagcgcctactatgccccggcttccgccgccgtggaaatggcggagtccatt
ttgaaggacaagaaaaaggtgctgccctgtgcagcctatctccagggcgaatacgggatt
aacgacctgtatatcggagttcctgtgaaactgggcaaaaacggcgtggagcaggtcatc
gaaatcaccttgaccgaagaggaaaagaccgcgttgatgaaatcggcagccgccgttcag
gggcttaaggacgacctggcaaaattaggttga
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