Deinococcus wulumuqiensis: DVJ83_12585
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Entry
DVJ83_12585 CDS
T05579
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
dwu
Deinococcus wulumuqiensis
Pathway
dwu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dwu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DVJ83_12585 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dwu03400
]
DVJ83_12585 (nth)
Enzymes [BR:
dwu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DVJ83_12585 (nth)
DNA repair and recombination proteins [BR:
dwu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DVJ83_12585 (nth)
Prokaryotic type
DVJ83_12585 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
Motif
Other DBs
NCBI-ProteinID:
AXG99818
UniProt:
A0A345IJE6
LinkDB
All DBs
Position
2510777..2511454
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AA seq
225 aa
AA seq
DB search
MTPTSASPRLPAGARARAPQVLSCLETLYPDARTELVFNTPFELLVATVLSAQATDVSVN
AATPALFAAYPDAHALSRATAEDIEPYIRSIGLYRGKARNLAALARLLVERHGGEVPNDF
GAVVALPGAGRKTANVVLSNAYGFPAIAVDTHVGRLARRLGLSVQTNPDKVELDLQKLFP
REKWVFLHHALILHGRRVCFARKPNCPGCVMADFCPKVGVEHVAV
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgacccccacttccgcctccccgcgcctgcctgccggagccagggccagagcgccccag
gttctgagctgcctggaaacgctctaccccgatgcccgcaccgaactcgtcttcaacacg
ccttttgaactgctcgtggcgacggtcctctccgcacaggccaccgacgtgagcgtcaac
gccgccactcccgccctgttcgccgcctaccccgacgcccacgccctgagccgggcgacg
gcggaagacatcgagccgtatatccgctccatcgggctgtaccggggcaaggcgaggaat
ctggcggcgctggcccggctgctggtggagcggcacggcggcgaggtgccgaacgacttc
ggcgcggtggtggccctgcccggcgcgggccgcaagacggcgaacgtggtgctgtccaac
gcctacggctttcccgccatcgcggtggacacccacgtgggccgcctcgcccgccgcctg
gggctgagcgtacagaccaaccctgacaaggtggaactcgacctgcaaaagctctttccc
cgcgagaaatgggtatttttgcaccacgccctgattctgcatggccgccgggtctgcttt
gcccgcaaacccaactgccccggctgcgtgatggccgacttttgcccgaaggtgggggtg
gagcatgtcgcggtctga
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