Dyadobacter chenhuakuii: NFI80_19270
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Entry
NFI80_19270 CDS
T08460
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc00300
Lysine biosynthesis
dyc00550
Peptidoglycan biosynthesis
dyc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NFI80_19270
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NFI80_19270
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dyc01011
]
NFI80_19270
Enzymes [BR:
dyc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NFI80_19270
Peptidoglycan biosynthesis and degradation proteins [BR:
dyc01011
]
Precursor biosynthesis
Amino acid ligase
NFI80_19270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AMPKBI
NBD_C
CbiA
LpxK
Motif
Other DBs
NCBI-ProteinID:
USJ29999
LinkDB
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Position
complement(4626984..4628462)
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AA seq
492 aa
AA seq
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MESTPEKILSDILIGVAGANVTGSDIVIIKSIILDSRRVMPGSLFVALRGTQTDGHQYIG
TATELGATAILCEELPEKISDNVTYIQVPDSAEAMGLIAAAFYNHPSQKITLVGVTGTNG
KTSVATFLFQLFRALGYRCGLISTVQNQIEDEVIPSTHTTPDAVALNHLLAQMQKNKCSH
VFMEVSSHAVAQHRITGLHFAGGIFTNITHDHLDFHKTFDNYIKAKKGFFDQLPKTAFAL
VNVDDRRGAVMVQNTKAKVETYSLQTLASFKGKIISDTLAGMHMEVNNQEVWFRVIGRFN
AYNLLSVYGAAVLLGEKPESVLTELSNLKSPPGRFEQFHSADNIVGIVDYAHTPDALENV
LETINHLRSGNEKVITVVGCGGNRDAEKRPKMAAIACKLSNRVILTSDNPRYEEPMDILE
QMRKGVPPLDYKKTSVIEDRYEAINRAFEEANPEDIILIAGKGHENYQEIKGVKHHFDDK
EVLLEAFAKRYS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccccagaaaaaattttaagcgatatcctgatcggcgtggccggcgcaaat
gttaccggctctgatatagtaataattaaaagcatcattctggattcccgaagggttatg
cccggaagcctgttcgtagcgctcaggggaacgcaaacggatggccatcagtacattggg
actgcaacggagcttggagcgactgctattctttgtgaagaacttcctgaaaaaataagt
gacaatgttacttacattcaggttccggattcggcggaagcgatggggcttattgccgct
gcattttataaccatccttctcaaaagatcacattagtaggcgtaaccggcacaaatggt
aaaacatctgtcgctacatttctcttccagcttttccgtgcactcggctatcgctgcggc
ctgatttcgacggtccagaaccagatagaggatgaagttatcccatctacacacacgacc
cccgatgctgttgcgctgaaccatttgcttgctcaaatgcagaaaaacaaatgcagccac
gtttttatggaggtaagctctcatgctgttgcacaacacagaattaccggtttgcacttc
gcaggaggtattttcaccaacatcacccacgatcacctcgatttccacaagacattcgat
aattatatcaaagcaaaaaaagggttcttcgaccaacttcctaaaactgcctttgcgctc
gtgaatgtcgacgatcgccgcggcgcggttatggtccagaacacaaaagccaaagtcgaa
acatattctttacagacgcttgccagttttaaaggaaaaattatttctgatacgctggcg
ggcatgcatatggaggttaataatcaggaagtttggttccgggttattggccggtttaat
gcttataacttgctttccgtttatggagcagcggttcttttgggtgaaaaaccagagtcg
gtgctgaccgaactttcgaacctgaaaagccctcccggacgttttgagcaattccattct
gcggataacattgtggggatcgtcgattatgcgcatacgccggatgctttggaaaatgtg
ctggaaaccatcaatcatttgcggagcggcaatgagaaagtgatcacggttgtaggctgt
ggcgggaaccgggatgcagaaaaaaggcctaaaatggctgctattgcttgtaaactgagc
aaccgggtcatcttgacatcggataatccacgctacgaagagcctatggatattctggaa
cagatgagaaagggagttccgccactggactacaaaaaaacatcggttattgaggatcgt
tacgaggcaattaacagggcttttgaagaggcgaatccggaagacattattttaattgcc
gggaaaggccatgaaaattatcaggaaatcaagggtgttaagcatcattttgatgataag
gaagttttgctggaagcttttgccaaacgttattcctga
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