Dyadobacter chenhuakuii: NFI80_23425
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Entry
NFI80_23425 CDS
T08460
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc00270
Cysteine and methionine metabolism
dyc00450
Selenocompound metabolism
dyc00670
One carbon pool by folate
dyc01100
Metabolic pathways
dyc01110
Biosynthesis of secondary metabolites
dyc01230
Biosynthesis of amino acids
dyc04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NFI80_23425 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NFI80_23425 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NFI80_23425 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
NFI80_23425 (metH)
Enzymes [BR:
dyc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
NFI80_23425 (metH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
USJ30796
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All DBs
Position
5579454..5583278
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AA seq
1274 aa
AA seq
DB search
MVATQNADIREILKSRILVLDGAMGTMIQRYKLEDHDYRGERFKDWPRDVKGNNDLLSLT
RPDIIKAIHAAYFEAGADIAETNTFSGTTIAMADYGMEELVYELNFESARLAREVADEFT
EKDPDKPRFVAGSIGPTNRTASLSPDVNNPGYRAISFDQLVEAYYEQIKGLTDGGCDLLL
VETIFDTLNAKAALFAIDQFFVDAKNGKIERLDSWRNKPGEALPIMISGTITDASGRTLS
GQTTEAFLTSVSHLPLLSVGLNCALGADLMRPYVQILAKEAPFFTSAHPNAGLPNEMGEY
DESPEQMGEVVDGFLRDNLVNIIGGCCGTTPDHIRVIADLSVKYSPRTLPPSETVMKLSG
LEPVKINKLSNFVNIGERCNVTGSKKFARLVREGKYDEALAIAREQVESGAQVIDVNLDE
GMIDGVEAMKTFVNLIVSEPDISKVPLMIDSSKWEVIESGLKCVQGKSIVNSISLKEGEE
KFKESARTVLRYGAAAVVMAFDEQGQADNLERRIEICSRAYRILTEEVGFPAEDIIFDPN
ILTVATGMEEHNNYAVDFINAVRWIKENLPHAKVSGGVSNVSFSFRGNEPVREAIHTAFL
YHAIRAGMDMGIVNAAQIGIYDEIPKDVLELVEDVLLNRRADSTERLVAYAETVKDKGKT
QSGPDLSWRELPVKERISHSLVKGISDYIDEDTEECRHLFARPLEVIEGPLMDGMSIVGD
LFGEGKMFLPQVVKSARVMKKAVAYLQPYIEAEKSEGNNSAGKILLATVKGDVHDIGKNI
VGVVLGCNNYEIIDLGVMVPTDKILAAAIEHNVDIIGLSGLITPSLDEMVGVAKEMERRN
FKMPLLIGGATTSRIHTAVKIDPNYSGAVIHVLDASRSVPVAGKLIQSDQSQADVLSDIK
AEYAKLRVDHAKRGGEKAHVPIAKARENKAKIDWASFQATKPQFLGTRVYDDYDLNDIAK
YIDWTPFFQTWQLHGKFPKIFEDKVVGAEAVKLYEDAAVLLGEIIRDKTLKAKAVIGFWP
ANSIQDDIVLHHFEEQTREVSCERHGSHQHIEYLISQPATENLNAGELVADTAAVLHHLR
QQSQKASNLANYCLSDFIAPLETGKTDYIGGFAVTAGIGIEALLDKYEKDHDDYNSIMVK
ALADRLVEALAELMHERVRKEIWGYAKNETFSNEDLIKESYMGIRPAPGYPACPDHTEKR
MLFDLLDAEQLGITLTESYAMYPASSVSGWYFSHPDSRYFPVGKIFKDQVEDYARRKDMP
LEEIEKWLSPVLGY
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaacgcaaaacgcagacatccgtgaaatcctgaaaagccgtatccttgtactg
gacggtgcgatgggaacgatgatccagcggtataagctggaagatcacgattacaggggc
gagcgtttcaaggactggccgcgtgatgtaaaagggaataatgacctgctttcactaaca
cgccctgacattatcaaagccattcatgctgcatatttcgaggcaggggcagacattgcc
gaaaccaatacattctcaggaaccaccattgccatggccgattacggcatggaggaattg
gtttatgaactgaattttgagtctgcgcgccttgcgagggaagttgcggatgagttcaca
gaaaaagatccggacaagccgcgtttcgttgcggggtctatcgggcctacgaaccggacc
gcgtcactttcgccggacgttaataaccccggttaccgggcgatcagctttgatcagctg
gtggaagcttattatgagcaaattaaaggtcttacggacggcggctgcgatctgctgctc
gttgaaaccatttttgatacattaaatgcgaaggctgcactttttgccatcgatcaattt
ttcgttgatgccaaaaatggtaaaatagagcgcctcgattcatggagaaataaacccggc
gaagcattgccgatcatgatatcgggaacaattaccgacgcttccggaagaacattatca
gggcagacgacagaagcatttctgacatctgtatctcacttaccattgctttcagtaggc
ttgaactgcgcattaggggccgatctgatgcgtccatatgtgcaaattctggcgaaagag
gccccattttttacttctgctcacccgaatgcaggtttgccgaatgaaatgggtgagtat
gacgagtctcccgagcagatgggcgaagtggttgatggatttttgagagataatctggtc
aacattatcggtggctgctgcggaacgacgccggaccacatccgcgtgattgcggacctg
tctgtaaaatatagcccaagaacattgccgccgagcgaaacagtgatgaaattatctggt
ttagagccggttaagatcaataagctgagcaattttgtgaacattggggagcgttgcaat
gtaaccggttcaaaaaaattcgccaggctcgtgcgtgaaggcaaatacgacgaagcactt
gccatcgcccgcgaacaggtcgaaagcggtgcgcaggtgatcgatgttaacctcgacgaa
gggatgatcgacggcgtggaggcaatgaaaacctttgttaacctcattgtttctgagcct
gatatttccaaagtgcccttaatgatcgactcttcgaaatgggaagtgattgaatcggga
ttgaaatgtgtgcagggcaagtcgatcgttaactcgatctctttgaaagaaggcgaggag
aaattcaaggaatccgcaagaacggtgcttcgctacggcgcggcggctgttgtaatggca
tttgacgagcaaggccaggctgataacctcgaacgacgcattgaaatttgttcgagagct
taccgcattttgacagaagaagttggtttcccagctgaggacatcatctttgatccgaac
attctgacggttgcaaccggaatggaagagcataataactacgcggttgactttatcaat
gccgttcgttggatcaaggaaaatcttccgcatgcgaaagtttcgggtggtgtttccaat
gtttctttcagtttcaggggaaatgaaccggtgcgtgaagccattcacacggcatttcta
taccacgcaatccgcgccggaatggatatgggaattgtaaatgctgcgcaaattggcatt
tatgatgagatcccgaaagatgtgcttgaactggttgaagacgtgctgcttaaccgtcgc
gccgactcaaccgaacgccttgttgcttatgcagagacagtaaaagacaaaggaaaaaca
caaagtggtcctgatctttcatggagagaattgccggttaaagagcgcatttcgcattct
ttggtaaaagggatttcggattatattgatgaggatacggaggaatgcagacacttgttt
gccagaccattagaagtgatagaagggccgttaatggacggaatgagcattgtgggtgat
ctttttggcgaaggaaaaatgttcctgccgcaggttgtgaaatcagctcgtgtaatgaaa
aaagcggttgcttatctgcaaccttacattgaggcggaaaaaagtgagggcaataattca
gccggaaaaatattgctcgccacagtaaaaggcgacgttcacgacattggcaaaaacatt
gtgggcgtggtgctgggctgtaacaattacgaaattatcgatctgggcgtaatggtgcct
acggataagatcctcgccgccgccattgagcataatgtggacattattggtctttcggga
ttaatcacgccttcgctcgacgaaatggttggtgtggccaaagaaatggagcgcagaaac
tttaaaatgccgcttttaatcggaggtgcaacaacttcgcgtatacacacggcagttaaa
atagaccccaattattccggtgctgtcattcatgttctcgatgcttccagatctgttccg
gtcgctggtaaactgatccaaagtgatcagagtcaggctgatgtattatcagacattaag
gctgaatacgccaagctgagagtcgaccatgccaaacgcggcggggaaaaagcgcatgtt
cccattgcaaaagcaagagaaaataaagcaaaaatcgactgggccagcttccaggcgacc
aagccgcaatttttgggaacaagggtttatgatgactatgatttgaatgacattgctaaa
tacattgactggacaccattcttccagacctggcagttacacggcaagtttcccaagatt
tttgaagacaaagttgttggagcggaagcagttaaattatacgaggatgctgcggtgctg
ctaggcgaaatcatccgggataaaacgcttaaagccaaagccgtgattggtttctggccg
gccaattcaattcaggatgacattgttttgcatcattttgaagagcaaacccgcgaagtg
tcttgcgaaaggcatggctcgcaccaacatatcgaatatctgatcagtcaaccggcaacg
gagaatctcaatgcaggggagcttgttgctgatacggcggcggttttacatcatttgcgt
cagcagtctcaaaaagcgtctaatctggccaattattgcttatcagattttattgcacct
cttgaaacgggaaaaaccgattatataggcggatttgcagtgactgcgggcatcggcatc
gaagcgcttttggataaatatgaaaaggaccatgatgattacaacagcattatggtgaag
gcactggcggatcgcttggtggaagcattggcggaattaatgcatgaacgcgttcggaag
gagatttggggttatgccaaaaatgaaacatttagcaacgaagacctcattaaggaaagc
tacatgggcattcgtcctgcacccgggtatccagcctgcccggaccacacagaaaagcgg
atgctattcgatcttttagacgcagaacagctcggcattacattgacggaaagctatgcc
atgtatcccgcaagcagcgtgagcggctggtatttttcgcatccggacagccgctatttc
cctgttggcaagatatttaaagaccaggttgaggattatgcaaggagaaaagatatgcct
ctggaagaaattgaaaagtggctttctcctgttttgggatactaa
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