Dyadobacter chenhuakuii: NFI80_24630
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Entry
NFI80_24630 CDS
T08460
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dyc
Dyadobacter chenhuakuii
Pathway
dyc01501
beta-Lactam resistance
dyc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dyc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NFI80_24630
01503 Cationic antimicrobial peptide (CAMP) resistance
NFI80_24630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dyc03036
]
NFI80_24630
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dyc02000
]
NFI80_24630
01504 Antimicrobial resistance genes [BR:
dyc01504
]
NFI80_24630
Chromosome and associated proteins [BR:
dyc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NFI80_24630
Transporters [BR:
dyc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NFI80_24630
Antimicrobial resistance genes [BR:
dyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NFI80_24630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
HlyD_2
Peptidase_M23
PTS_EIIA_1
MlaD
Motif
Other DBs
NCBI-ProteinID:
USJ31029
LinkDB
All DBs
Position
5870152..5871201
Genome browser
AA seq
349 aa
AA seq
DB search
MKRLLIFLAVIAGIGLTAAKLLDNKEKTAQKVYIPDTDPKVGVKVAVAEIRRLSQEASFL
GSFTPNRKVEIRPQAGGEIVRLNIEEGQFVKAGQLIAKLDDEQLRYQIEAAQVTLEGYQN
DLKRYEVLVKGDAVPAVNLERTQLSIRSTEAQIKQLKKQVANTSIIAPFSGIVTAKMVEK
GSVVSIGTPMAEITDISLLKLVVNIPEKSVNEFRNGKTIGIKTDVYPDADFKGKVTMVSA
EGDDAHNYPVEITVQNSQKNPLKAGMYGSIANTGEVKGEALAVPRQAITGSAKQPQVYVV
ENGKANMRDVAIGATTNEFYEITKGLKAGDKVVTSGQINLQNGTSVVAQ
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtttacttatatttttagccgtgattgcaggcataggacttactgcggcaaaa
ttgctggacaacaaagaaaagacagcacagaaagtttacatacccgatacagatcccaaa
gtaggtgtgaaagttgccgtcgcagaaatacggcgattatcacaggaagcatcctttttg
ggatcttttactcccaaccgcaaagtagagatccgtccgcaggcaggcggcgaaatcgtt
cgtctgaacattgaagaaggacaattcgtaaaggccggacaactgatcgccaagctggac
gacgagcaattgcgttaccagatcgaggccgcgcaggttacattggaaggttatcagaat
gatttgaaacgttacgaagtgctcgtcaaaggcgacgcggttcctgcggtaaacctggaa
agaactcagctgagcattcgcagcacagaagcgcagatcaagcaattgaaaaaacaggtt
gccaacaccagcatcatcgctcctttctcggggattgtgacggccaaaatggttgaaaaa
ggctccgtagtgagcataggaacgcctatggccgagattacagacatttccctgctgaaa
ttggtggtgaatattcctgaaaaatcggtaaatgagtttcgcaatggcaaaacgatcggc
attaaaacggatgtttatcctgacgcagatttcaaagggaaagtgaccatggtaagcgca
gaaggcgatgatgcgcacaattatccggtagagatcacggttcagaattcacagaaaaat
ccattgaaagcaggcatgtatggctccatcgccaacactggcgaagtgaagggcgaagca
ttggccgtgccacgccaggcaattacgggttcagcgaaacagccacaggtttacgtggtt
gaaaacggcaaagcaaacatgcgcgacgtagccatcggcgccacgaccaacgaattttat
gaaatcacaaaaggactgaaagcgggcgacaaagtcgtgaccagcggacagattaacctg
caaaacggaacttctgttgttgcacaataa
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