Dyella sp. GSA-30: DYGSA30_02380
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Entry
DYGSA30_02380 CDS
T10269
Name
(GenBank) RND transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dyg Dyella sp. GSA-30
Pathway
dyg01501
beta-Lactam resistance
dyg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dyg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DYGSA30_02380
01503 Cationic antimicrobial peptide (CAMP) resistance
DYGSA30_02380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dyg03036
]
DYGSA30_02380
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dyg02000
]
DYGSA30_02380
01504 Antimicrobial resistance genes [BR:
dyg01504
]
DYGSA30_02380
Chromosome and associated proteins [BR:
dyg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
DYGSA30_02380
Transporters [BR:
dyg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
DYGSA30_02380
Antimicrobial resistance genes [BR:
dyg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DYGSA30_02380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
RND-MFP_C
BSH_CzcB
HH_MFP_RND
Beta-barrel_RND
BSH_CusB
BSH_YhbJ
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
BDU18781
LinkDB
All DBs
Position
complement(262882..264066)
Genome browser
AA seq
394 aa
AA seq
DB search
MSSEFKTPTPTHPRKLRLAGLIAAIVAVGIVVLGVTSRATDAHKLRTWTDEQAIPSVAVV
DPEPGKAGNGLELPGRLEAYSRAPIFARINGYLKNWKVDIGTPVKSGQLLAEIDTPDLDQ
QLLQAKADYASAQANQALAAITAKRWQAMLGSDSVSKQEVDEKTGDLTAKSALANAAKAN
LDRLQATKAFARIIAPFDGIVTARNTDVGQLINIGGATGQELFTVSDVRKLRVYVQVPQN
YVPSIKQGAVATLTVPEHPGQVFKATVESSAQAVNATSGSTLVQLSVDNADSQLMPGAFA
NVKFDLPISATALRVPASALIFDNQGLRVATVSADNKVAFKTVTIARDYGKSVEIGAGLD
KGDRVIESPPDGLANGDPVKIADKTADKPNEKKA
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgaattcaaaactcctacgccgacccatccgcgcaagctgcgcctggccgga
ctgatcgccgcgatcgtggcggtcggcatcgtggtccttggcgtcacctcgcgcgccacc
gatgcgcacaagctcaggacctggaccgacgagcaggctattccatcggtcgccgtcgtc
gatccggagccgggcaaggccggtaacggcctggaactgcctggccgtctggaagcctat
tcgcgtgcgccgatcttcgctcgcatcaacggctacttgaagaactggaaggtcgatatc
ggcacgccggtgaagtccggccagttactggccgagatcgacacgcccgacctcgatcaa
cagctgctgcaggccaaggcggactacgccagtgcgcaggccaatcaggcgctggcggcg
atcacggccaagcgttggcaggccatgctcggctccgattcggtgtccaagcaggaagtc
gacgagaaaaccggcgacctgactgccaagagcgcgctcgccaatgccgccaaggccaat
ctcgatcggctgcaggcgaccaaggcgtttgcgcgcatcatcgcgccgttcgacggcatc
gttaccgcacgcaataccgacgtcggccagttgatcaatatcggcggtgcgaccgggcag
gaactgtttaccgtctcggacgtgcgcaagctgcgtgtctacgtacaggtgccgcagaac
tacgtgccctcgatcaagcagggagcggtcgcgacgctcacggtgccggagcatcctggt
caggtattcaaggccactgtggaatcgtctgcgcaggccgtcaatgccacttccggttcg
accctggtgcagttgtctgtcgataacgcggacagccagttgatgccgggcgcattcgcc
aacgtcaagttcgacctgccgatcagtgctacagcgctgcgcgtgccggccagtgcgctg
atcttcgacaaccagggtctgcgcgtggccacggtgagcgccgacaacaaggtggcattc
aagacggtcaccatcgcgcgcgactacggcaagagcgtggaaatcggtgccggcctggac
aagggcgatcgcgtgatcgaaagcccgcccgatggcctggccaatggcgacccggtgaag
attgcagacaagacggcggacaagcccaatgaaaagaaggcttaa
DBGET
integrated database retrieval system
