Durio zibethinus (durian): 111277213
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Entry
111277213 CDS
T05242
Name
(RefSeq) 5'-3' exoribonuclease 4 isoform X1
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
111277213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111277213
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
111277213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
111277213
NCBI-ProteinID:
XP_022719208
UniProt:
A0A6P5WTQ7
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MGVPAFYRWLADRYPQSIADVIEEEPREDGNGNQVPVDVSKPNPNGHEFDNLYLDMNGII
HPCFHPDGKPAPATYDHVFKSIFDYIDHLFSLVRPRKLLYMAIDGVAPRAKMNQQRTRRF
RAAKDAAEAEAEEERLRKEFEAEGKALSPKEKPETCDSNVITPGTPFMAVLSVALQYYIQ
SRLNHNPGWQNTKVILSDANVPGEGEHKIMSYIRLQRNLPGFNPNARHCLYGLDADLIML
SLATHEIHFSILREVITLPGQQEKCFLCGQVGHLAAECTGRPDNGNKEWNAVDDTPIHKK
KYQFLNIWVLREYLQYDLEIPNPPFEINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGA
INLLMQVYKREFAAMGGYLTDAGEVFLDRVECFIQSVSVYEDQIFQKRTRIQLAYENNEQ
MKLKARGESSEEAQAPIIDKIKLGEPGYKERYYAEKFDVSNPGEIEEVKRDVVLKYVEGL
CWVGRYYYQGVCSWQWFYPYHYAPFASDLKDLSDLEITFFKGEPFKPFEQLMGTLPAASS
KALPEEYGKLMADPSSPIYNFYPSDFEIDMHGKRFAWQGVVKLPFIDEKKLLAATRKLEV
TLTDEEKFRNSVMLDLLYVHPLHPLASQVIYYYQICSHLPPHERFLLPIDTNASGGMNGF
LGLSERNGWQDVVSSPVKGLPHIELNKVLNVTYHNPSRHKHIPELPQGVVIPKKVLTPLD
VKPFPVLWHEDNGGRRQQGRDRAQVPGAIVGPQLGEAAHRLVKNTLNIKSNGSSSGLLEQ
PSLFNISSNYTSIRPRPAGPSGYERGFFDDPNHYYINRPRAAGASVYERGYGDGPNYYGR
YNHPQMGNPRHPSSNGMQVRNNFSSNGMQVRNNFRAQDRLQDQEHYHDLRTGMSALTSEG
STRGRAHAEVSLRMPNSGYSQNLDQRSEQNTGALPTPPNKWIIKPVNVNTGTFLRQENAS
SGAYEKQVKKVYQIKTRPQEMIGPVNHQ
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttttacaggtggttagcggatcggtacccgcaatcaatcgccgac
gttattgaggaagaaccgagagaagacggaaacggaaatcaagtgccagttgacgtctcg
aaacctaaccctaacggccacgaattcgataatctttatctagatatgaacgggattatt
cacccttgttttcatcccgatggcaagcctgcaccagccacttatgatcatgtgttcaaa
tctatctttgactatattgaccaccttttctcattggttcgtcctagaaagcttctgtat
atggcaattgatggtgttgctcctagagctaaaatgaatcagcaacgtactcgacgtttt
agagctgcaaaagatgctgccgaggctgaagctgaagaggagagattgaggaaagagttc
gaggctgaagggaaggcattgtcccccaaggaaaaacctgaaacatgtgactcaaatgtt
ataactcctggcactccatttatggctgtgttgtctgtagcccttcagtattatatacaa
tctaggttgaatcacaatcctggctggcagaatacaaaggttattctttctgatgcgaat
gttcccggtgagggagaacacaagattatgtcatatattcggttacaacgtaaccttcct
ggcttcaacccaaacgcacgacactgtctgtatggcctggatgcagatttgatcatgttg
tccttagctacacatgagattcacttttcaattttaagagaggtgatcactcttcctgga
caacaggaaaaatgttttctttgtggtcaagttggtcatctggcagcagagtgtactggt
aggccagataatgggaacaaagaatggaatgctgtggatgatacaccaattcacaagaag
aaatatcagtttcttaacatatgggtgttgcgagaatatttgcaatatgatttggagatc
cccaatcctccatttgagataaactttgagcgaatagtggatgattttgttttcttatgt
ttctttgtgggcaatgacttccttccgcatatgccaacattagaaattagggagggtgct
ataaatcttctgatgcaagtttataaaagggaatttgctgctatgggtggttatcttact
gatgcgggtgaggtttttttagatagagtggagtgttttattcaatctgtttctgtttat
gaagatcaaatctttcagaagaggactcgtatacagctggcatatgagaataatgagcag
atgaagcttaaagcaagaggagagtcctctgaggaggcacaggcacccatcatagataag
attaaattaggggaaccaggatacaaagaaagatattatgctgagaaatttgatgtatca
aatcctggggagattgaagaagttaaaagagatgttgttttgaagtatgttgaaggttta
tgctgggtaggtcgctattactaccaaggtgtttgctcttggcaatggttttatccatat
cattatgctccatttgcttcagatctaaaggatctatctgatttggaaataacatttttc
aagggagagccatttaaaccctttgaacagctcatgggaacactgccagctgccagttct
aaagctttgccagaagaatacgggaaactgatggctgatccatcatcacctatttataat
ttctatccctctgattttgagattgacatgcatggtaaacgctttgcatggcagggtgtt
gtcaaattgccattcatcgatgagaagaagttacttgctgcaacaagaaagcttgaagtt
actttaacggacgaagagaagtttcgaaacagcgtgatgcttgatctgctatatgttcat
cctcttcatcctttggcatctcaagttatttattattatcaaatttgctctcatttaccg
cctcatgaaagatttttattgcccattgacacaaatgctagtggtggaatgaatggattt
cttgggttatctgaaaggaatggttggcaagatgtagtctcttcccctgttaaggggttg
ccacatatagaacttaacaaagttttgaatgttacatatcataatccttcacgtcataaa
cacattccagaacttccacaaggtgttgtgatccccaaaaaggttctaacacctcttgat
gttaaaccttttcctgtactgtggcatgaagacaatggtggccggcgccagcaaggcaga
gatcgggcacaagtaccaggagctattgttggccctcagcttggtgaggcagctcatcgt
ctcgtcaagaatactcttaatatcaaatcaaatggctcatcctctgggttgttggagcaa
ccatcactttttaatatctcaagcaactacacaagcattagaccaagacctgcaggacca
tcaggttatgaaaggggctttttcgatgacccaaatcattattatatcaatcgaccacgt
gcagctggagcctcagtttatgaaaggggatatggtgatggcccaaattattatggacga
tacaatcatccacaaatgggtaacccaagacatccctcatcaaatggtatgcaagtcaga
aacaacttctcatcaaatggtatgcaagtcagaaacaacttcagggcacaggataggcta
caggatcaggaacattatcatgatttgaggactggaatgtctgctttgacatctgaggga
agtaccagaggtagagcacatgcggaggtgtctctaaggatgccaaattctggatactca
caaaatttagaccagcggtcggagcagaacactggtgctcttcccacaccacccaataag
tggatcattaagccagtgaatgtaaatactggaactttcttaagacaagaaaatgcatca
agtggagcttacgagaagcaggtgaagaaggtttatcagatcaagactcgtccacaggaa
atgattggtcctgtaaaccatcagtga
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