Durio zibethinus (durian): 111301268
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Entry
111301268 CDS
T05242
Name
(RefSeq) LOW QUALITY PROTEIN: 110 kDa U5 small nuclear ribonucleoprotein component CLO-like
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111301268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111301268
Spliceosome [BR:
dzi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111301268
Complex C
U5 SnRNP specific factors
111301268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Dynamin_N
Septin
Motif
Other DBs
NCBI-GeneID:
111301268
NCBI-ProteinID:
XP_022752550
UniProt:
A0A6P5ZJG6
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MDDNLYDEFGNYIGPEIESDQESEGEEEEDXEDLADRHAQVEGEESDGEDPAGASNGWIT
AANDVDMANQIVLAEDKKYYPTAEEVYGEDVETLVMDEDEQPLEQPIIKPVKNIKFEVGV
KDSSTYVSTQFLIGLMSNPGLVRNVALVGHLQHGKTVFMDMLVEQTHHMNTFDENSEKHM
RYTDTRIDEQERRISIKAIPMSLVLEDSNSKSYLCNIMDTPGHMNISDEMTAALRLADGA
VLIVDAAEGMMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVI
NNHISAASTAAGNVPVVDPAAGNVCFASASAGWSFTLQSFAKLYVKLHEIPFDAEKFASR
LWGDIYYHPDTRAFKRKPPAGGGERSFVELVLEPLYKIYSQVIGEHRKSVESTLAELGVT
LSNAAYKLNVRPLLRLACSTVFGSASGFTDMLVQHIPSPKDAAAKKVDHIYTGPKHSMIY
KAMVDCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGRIQTGQTLRVLGEGYSPDDEEDM
TVKEVTKLWIYQARFRIPISSAPPGSWVLIEGVDASIMKTATLCNTELDEDIYIFRPLQF
NTLPVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMK
DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN
GVVSVDWSRKQLGDFFKTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKVLLGSV
RDSIVQGFQWGAREGPLCDEPIRNVKFKIVDARIASESLHRGSGQIIPTARRVAYSAFLM
ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFG
FETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG
MSEDVSINKFFDEAMVVELAQQAADLHQQMI
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggatgataacttatatgatgaatttgggaactatattggacctgagatcgagtccgac
caggagagtgaaggtgaggaagaagaagatnntgaagaccttgctgacagacatgcccaa
gtggaaggagaagaatctgatggtgaggatccagctggtgcgtctaatggatggattaca
gctgctaatgacgttgatatggctaatcagatagttcttgctgaggacaagaagtattac
cccactgctgaagaagtttatggtgaggatgttgagaccttggttatggatgaagatgag
cagcctcttgaacaacctattattaaacctgttaagaatatcaagtttgaggttggagtt
aaggattcttcgacttatgtgtcgacacagtttcttattggtttgatgtcaaacccgggt
ttggttcgcaatgttgcccttgttggacacttgcagcatgggaagacggtgtttatggat
atgttggttgagcaaactcatcacatgaacacatttgatgaaaatagtgagaagcacatg
agatacactgatacaagaattgatgagcaagagagaaggatatctatcaaggcaatccca
atgtcacttgttcttgaggatagtaactcgaaatcctatctctgtaacatcatggacact
cctggtcacatgaatatttctgatgaaatgactgctgctcttaggcttgctgatggtgct
gtgttgattgttgatgctgctgaaggaatgatggtaaatactgagagggctatacgccat
gcaatacaggagcgcctacctattgtagttgttataaacaaggttgaccgactgataaca
gaacttaagttgccacccaaggatgcttaccataagctaagacataccctggaagtaatc
aataaccacatatctgccgcctccacagctgctggtaatgttccagttgttgatcctgct
gctggaaatgtttgttttgctagtgcaagtgcaggatggtccttcactttgcagtcattt
gcaaaattatatgtcaaactccatgaaattccatttgatgctgagaagtttgcttctcgt
ctttggggagatatttattatcatcctgatacaagggcttttaaaaggaaacctcctgct
ggtggaggagaacgatcatttgtcgaacttgtgcttgaacccctttataagatatatagc
caggtgatcggtgaacatagaaagagcgtagagtcaactcttgcagagttgggtgtcact
cttagcaatgctgcttacaagttaaatgtcaggcctttgctaaggcttgcttgcagcaca
gtttttggttcagcctcaggcttcactgatatgctggttcagcacataccatctcccaag
gatgctgcagctaagaaggttgatcatatatacacgggacctaaacattctatgatttac
aaggccatggtagattgtgatccttctggcccccttatggttaatgtgaccaaactatac
cccaagtccgattgtagtgtttttgatgcttttggtagggtttacagtggtagaattcaa
acagggcagactttgagagtgctaggagaaggctattcaccagatgatgaggaggacatg
acagtgaaagaagtaaccaaattatggatctaccaagctcgattcagaatacccataagc
agtgctcctcctggatcttgggttctcattgaaggtgttgatgcttcaattatgaaaact
gccaccctctgtaatacagaacttgatgaagacatatacatattccgtcctttacagttt
aatactcttcctgttgtaaaaacggccactgagcctttaaatcccagtgagttgcccaaa
atggtggaggggcttcgaaagatcagcaaaagctatcctctagctatcactaaagttgag
gaatctggtgagcacactatattaggtactggagagttgtacttggactcgattatgaag
gaccttagggagctctattctgaggtggaagttaaggtggcagatcctgttgtttcattc
tgtgaaacagtggtggagtcttcatccatgaaatgctttgctgaaacacccaacaagaag
aataaaataaccatgattgcagagccattggagagaggtcttgcagaggacatagagaat
ggtgttgtaagtgttgattggagtcggaagcaacttggtgacttctttaagacaaaatat
gactgggatttgcttgctgctcgttccatctgggcatttggccctgataagcagggacct
aacattttattagatgatacactccctactgaggttgacaaggtattactgggttctgtt
agggattctattgtccaaggatttcagtggggtgctagagaaggacctctctgtgatgaa
ccaattagaaatgtgaagttcaaaatagtagatgcaaggattgcatctgaatcattgcat
cgaggatctggacagatcatccccacagctcgacgtgtggcctattcagctttcctaatg
gcaaccccacggcttatggaacctgtatattatgtggagatacaaacaccaatcgactgt
gtctctgctatctacactgtgttgtctcgtaggcgtggccatgttactgctgatgtgcca
cagccaggaaccccagcctatattgtaaaggcatttttacctgttatagagtcatttgga
ttcgagacagatctaaggtaccacacccaagggcaagccttttgtctctcagtgttcgac
cactgggccatagttcctggagatcccctggacaagagcatagttttgcggcctcttgaa
cctgcaccaattcagcatcttgctcgggagttcatggtgaagacaaggcgtagaaagggt
atgagtgaagatgtgagcatcaacaaattcttcgatgaggctatggtggtggagctggct
cagcaggctgctgatcttcatcagcagatgatataa
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integrated database retrieval system
