Duganella zoogloeoides: SR858_02965
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Entry
SR858_02965 CDS
T09628
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dzo
Duganella zoogloeoides
Pathway
dzo01501
beta-Lactam resistance
dzo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SR858_02965
01503 Cationic antimicrobial peptide (CAMP) resistance
SR858_02965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzo03036
]
SR858_02965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_02965
01504 Antimicrobial resistance genes [BR:
dzo01504
]
SR858_02965
Chromosome and associated proteins [BR:
dzo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SR858_02965
Transporters [BR:
dzo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SR858_02965
Antimicrobial resistance genes [BR:
dzo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SR858_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_CusB
BSH_RND
YknX_C
RND-MFP_C
BSH_CzcB
CzcB_C
HH_MFP_RND
Biotin_lipoyl
Beta-barrel_AprE
BSH_YknX
LcnD_C
BSH_Fcp1
Beta-barrel_YknX
HH_EMRA
Beta-barrel_ALG44
HH_YBHG
EPCAM-Trop-2_C
BSH_YhbJ
Motif
Other DBs
NCBI-ProteinID:
WQH05310
UniProt:
A0ABZ0XZW0
LinkDB
All DBs
Position
complement(660080..661309)
Genome browser
AA seq
409 aa
AA seq
DB search
MTMTAPHPIPLHPARDHAWRKPVLAAAVVAVLAGGAWFALQRAPAPATPASATKVAEKPP
VLELGSADVAAISARSLALSLPLSGSLAPLSSATIKSKVSGVVQATTVQEGMAVAAGQVL
ARIDQADLRARLQQQHAQLDEAQARLAMATKNEANSGALLAQKYISQNAYDSTQNSVELA
RAAVKSAQAMVEIARIALEDGVIRAPIAGVVSKRHVQAGEKLAPDMPVFSIVNLAELTLE
AQVPASEIPRVRVGQDVRFRVDGYQQREFTGKVARINPSTEAGSRALLVYIAVRNVDAAL
RAGMFAKGAIVTDRADVAPVVPLAALRDDHGRQVVYRVDDGKVVAQPVTLGLRNDDEGTA
QVVAGLQDGARVIVSKLPALKPGAQVSLPAEAASTAAAATAAASQPKKG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaccgccccgcacccgattcccctccaccctgcccgcgaccatgcatggcgc
aagccggtactggcagccgccgtcgtggccgtgctggccggcggcgcctggtttgccctg
cagcgtgcgccggcgcctgccacgccggcttcggccaccaaggtggcggaaaagccgccg
gtactggaactcggcagcgccgacgtggccgccatttccgcccgatcactggcgctcagc
ttgcccttgtccggctcgctggcgcccctttcatcggccaccatcaagtccaaggtctcc
ggcgtggtgcaagcgaccacggtgcaggaaggcatggcggtggctgccggccaggtgctc
gcgcgcatcgaccaggccgacctgcgcgcgcggctgcaacagcagcatgcacaactcgac
gaggcccaggcccggctggcgatggccaccaagaacgaagccaacagcggcgcgctgctg
gcgcagaaatacatctcgcaaaacgcctacgattccacccagaacagcgtggaactggcg
cgcgctgccgtcaaatcggcgcaggcgatggtcgagatcgcccgcatcgcgctcgaggac
ggcgtgatccgggcgccgattgccggcgtggtcagcaagcgccacgtgcaggccggcgaa
aagctggcgcccgacatgccggtgttcagcatcgtcaacctggccgaactgacgctcgag
gcacaggtgccggcctcggaaattccgcgcgtgcgcgtgggccaggacgtgcgcttccgc
gtcgatggctaccagcagcgcgaattcaccggcaaggtggcgcgcatcaacccgtccacc
gaggccggctcgcgcgcgctgctcgtgtatatcgccgtgcgcaacgttgatgcggccttg
cgggccggcatgttcgccaagggcgccatcgtcaccgaccgcgccgacgtggcgccggta
gtgccgctggccgcgctgcgcgacgatcacggccgccaggtcgtgtaccgcgtcgatgac
ggcaaggtggtggcgcagccggtcacgctgggcctgcgcaacgacgacgaaggtacggcg
caggtggtggccgggctgcaagatggcgcgcgggtcatcgtttcaaaactgcctgccctg
aaaccgggtgcgcaggtcagcttgcctgctgaagctgcctccactgcggctgcggcaacg
gcagcagcgtcccagccgaagaaaggctga
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