Duganella zoogloeoides: SR858_03940
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Entry
SR858_03940 CDS
T09628
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dzo
Duganella zoogloeoides
Pathway
dzo01501
beta-Lactam resistance
dzo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SR858_03940
01503 Cationic antimicrobial peptide (CAMP) resistance
SR858_03940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzo03036
]
SR858_03940
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_03940
01504 Antimicrobial resistance genes [BR:
dzo01504
]
SR858_03940
Chromosome and associated proteins [BR:
dzo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SR858_03940
Transporters [BR:
dzo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SR858_03940
Antimicrobial resistance genes [BR:
dzo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SR858_03940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
CzcB_C
HH_YBHG
RND-MFP_C
BSH_Fcp1
Beta-barrel_RND_2
HH_MFP_RND
BSH_RND
Biotin_lipoyl
BSH_CusB
BSH_LcnD
BSH_YknX
DUF406
Motif
Other DBs
NCBI-ProteinID:
WQH05500
UniProt:
A0ABZ0Y0F0
LinkDB
All DBs
Position
complement(894363..895526)
Genome browser
AA seq
387 aa
AA seq
DB search
MKTLKSTLKPANLKPTVLALLAVFAVAGAGMAFYSPATQAADDKKAAAPKPALTVTVVKP
SSARLPITLTANGNVAAWQEASVSSESNGLRLTEVRVNVGDVVKAGDVLAVFSADTVNAD
VAQAKAALLEAQANAADAVANAARARTLQDSGALSAQQISQYNTAEQTANARIASAQAAL
ATQQLRLKYTKVVAPDSGVISARTATVGAVSAPGTELFRMIRQGRLEWRAEVVAQDLRSI
VPGSTALVKAANGSETTGKVRMIAPTVDLQTRSALVYVDLPQNAGSKDAPFKAGMFASGK
FELGSSEALTVPQQAIVVRDGFSFVFRLTPDNHVAQVKVQPGRRLGNRIEVVGGLKADTP
VVLRGAGFLNDGDLVHVVAEQAATASK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactctgaaatcgactctgaagcctgcgaatttgaagcccaccgtgctggccctg
ctggcggtgttcgcggttgccggcgccggcatggcgttctattcgcccgccacgcaagcg
gccgacgataaaaaagccgccgcgcccaagccggcgctgaccgtcaccgtggtcaaaccg
tcgtctgcgcgcctgcccatcacgctgactgccaacggcaatgtcgccgcctggcaggag
gccagcgtgagcagcgaatcgaacggcttgcgcctgaccgaagtgcgtgtcaacgtgggc
gacgtggtcaaggccggcgacgtgctggccgtgttctcggccgacaccgtcaacgccgac
gtggcgcaggccaaagcggccctgctcgaagcgcaagccaatgccgccgacgccgtggcc
aatgccgcgcgcgcccgcacgctccaggattccggcgcgctcagcgcccagcaaatcagc
cagtacaacaccgccgaacaaaccgccaacgccaggatagcctcggcccaggcggccctg
gccacgcaacagctgcgcctgaaatacaccaaggtggtcgcgcccgacagcggcgtgatc
tcggcgcgtacggccaccgtgggcgcggtgtcggcgccgggcacggagctgttccgcatg
atccgccagggccgcctcgaatggcgcgccgaggtggtggcgcaggacctgcgcagcatc
gtgcccggctcgaccgcactggtgaaagcagccaacggcagcgagaccaccggcaaggtg
cgcatgatcgcgccgaccgtggacctgcaaacccgctcggcgctggtgtacgtggacctg
ccgcagaacgccggctcgaaagacgcgccgttcaaggccggcatgttcgccagcggaaaa
ttcgaactgggttcgtccgaggccctgaccgtgccgcagcaggccatcgtggtgcgcgac
ggcttcagcttcgtattccgcctcacacccgacaaccacgtggcgcaggtgaaggtgcag
ccgggccggcgcctgggcaaccgcatcgaagtggtgggcggcctgaaggccgatacgccg
gtggtgttacgcggcgccggcttcctcaacgacggcgacctggtacacgtggtggccgaa
caagccgctactgcctccaagtaa
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