Duganella zoogloeoides: SR858_08715
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Entry
SR858_08715 CDS
T09628
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dzo
Duganella zoogloeoides
Pathway
dzo01501
beta-Lactam resistance
dzo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SR858_08715
01503 Cationic antimicrobial peptide (CAMP) resistance
SR858_08715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzo03036
]
SR858_08715
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_08715
01504 Antimicrobial resistance genes [BR:
dzo01504
]
SR858_08715
Chromosome and associated proteins [BR:
dzo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SR858_08715
Transporters [BR:
dzo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SR858_08715
Antimicrobial resistance genes [BR:
dzo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SR858_08715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
Beta-barrel_RND
BSH_CzcB
YknX_C
BSH_CusB
Biotin_lipoyl
BSH_YknX
RND-MFP_C
NQRA_N
CzcB_C
Beta-barrel_YknX
LcnD_C
BSH_LcnD
PYNP_C
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
WQH06388
UniProt:
A0ABZ0Y2Y0
LinkDB
All DBs
Position
1962774..1963913
Genome browser
AA seq
379 aa
AA seq
DB search
MTKRMLIMVGCVILLVAALAFGKYLQIQKLIASSPKPGAQTVTAIKVAASEWQPQISAVG
TLAPVRGVDVTTEIAGLVRKVNFKSGDEVKAGQVLFELNAESDQAQLRSLQAAADLAATT
LKRDKLQLGAQAISQAQVDNSEAELKSRQALAAQQQALVNKKTIRAPFAGKLGITAVNPG
QYLNPGDTLVTLQTIDTVYVDFYVPQKQVAELSVGQKLKLTSDGYPGVSFAAKVTAISPK
VDAATRNVQVQATVPNQKRQLLPGMFANVSLEQGALKKYLTLPQTAITYNPYGSTVFVLA
QGTGKDAPKDDKGNAQLIAQQVFVTTGPTRGDQVAVLTGVKEGQTVVTSGQLKLKNGTPA
VINNRVQPANSPNPTPQEQ
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcgtatgctcatcatggttggatgcgtgatcttgctggtcgccgcgctggcg
ttcggcaaatatctgcagatacaaaaactgatcgccagctcgcccaagccgggagcgcaa
acggtcaccgcgatcaaggtcgcggcgtccgaatggcagccgcagatcagcgccgtgggt
acgctggcgccggtgcgcggcgtcgatgtcaccaccgaaatcgccggcctggtccgcaag
gtcaatttcaagtcgggcgacgaggtcaaagccggccaggtgctgttcgaactcaatgcc
gaatcggaccaggcgcaattgcgttcactgcaggccgcggccgacctggccgccaccacg
ctcaagcgcgacaagctgcaactgggggcgcaggcgatcagccaggcgcaagtcgataac
agcgaggcggaactgaaaagccggcaggcgctcgctgcacagcagcaggcgctggtcaac
aagaaaaccatccgcgcgccgttcgccggcaagctgggcatcaccgccgtcaacccgggc
cagtacctgaaccccggcgacacgctggtcacgctgcaaaccatcgataccgtgtatgtc
gatttctacgtgccgcaaaagcaggtggccgaactgtcggtgggccagaagctcaagctc
accagcgacggttatccgggcgtgtcgttcgctgcgaaagtaaccgccatcagccccaag
gtcgatgcggccacgcgcaacgtgcaggttcaggccacggtgcccaaccagaaacgccag
ctgctgcccggcatgttcgccaacgtgagcctggagcagggcgcgctgaaaaaatacctg
accttgccgcagacggcaattacctataatccttacggctccaccgtgttcgtgctggcg
cagggcaccggcaaggatgcaccgaaagacgacaagggcaatgcgcaactgatcgcgcag
caggtgttcgtcaccaccggccccacgcgcggcgaccaggtggccgtgctcaccggcgtc
aaggaaggccagaccgtggtcactagcggccagctcaaactgaagaacggcacgccggcg
gtgatcaacaaccgcgtgcagccggccaacagtccgaaccccacgccgcaggaacagtga
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