Duganella zoogloeoides: SR858_18780
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Entry
SR858_18780 CDS
T09628
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
dzo
Duganella zoogloeoides
Pathway
dzo01501
beta-Lactam resistance
dzo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SR858_18780
01503 Cationic antimicrobial peptide (CAMP) resistance
SR858_18780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzo03036
]
SR858_18780
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_18780
01504 Antimicrobial resistance genes [BR:
dzo01504
]
SR858_18780
Chromosome and associated proteins [BR:
dzo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SR858_18780
Transporters [BR:
dzo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SR858_18780
Antimicrobial resistance genes [BR:
dzo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SR858_18780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
YknX_C
HH_EMRA
BSH_CzcB
BSH_CusB
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
WQH03094
UniProt:
A0ABZ0XUL6
LinkDB
All DBs
Position
complement(4247978..4249177)
Genome browser
AA seq
399 aa
AA seq
DB search
MEALFCKPSLRTAGVAALITATAFVAGCSKSTSEAPQKPQVAEVGVYKVVQEPLQITTEL
PGRTSAFQVAEVRPQVNGVILKRLFVEGSDVKAGTALYQIDPSIYQANVNSAKAALTRAK
ANLLTSGPKVARYKELLAIEGVSRQDYEDALAADAQAQADIESATAALQEANINLRYTNV
YAPISGRISRSTVTPGALVTANQTEALTTVQQLDPIYVDVTQSSEDLLRLKREMADGSLK
QSGQAKVSLVLADGTKYAEAGKLQFSDVSVDQGTGNVTLRAIFPNPKQNLLPGMFVRAVI
ESGVDEKAITVPQQGVTRNQKGQATALVLNKEGKVEQRVLTTAGTYGTKWLVKSGLADGD
QVIVEGVQKVKPGAPAVVAKAPAAAPAAGGAPAAPAAKQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcttttctgcaaaccgtccctgcggacggccggggtcgcagccctgatcact
gcaaccgccttcgtggctggttgctccaaatccacgtccgaagcacctcaaaaaccgcag
gtggcggaagtgggcgtctataaagtggtgcaagagccactgcaaatcacgaccgaactg
ccgggtcgcaccagcgccttccaggtggctgaagtgcgcccgcaggtcaacggtgtgatt
cttaaacgcctgtttgtcgaaggttccgacgtcaaggccggtaccgccctgtaccagatc
gatccatcgatctatcaagccaatgtcaattcggccaaggcggcgctcacgcgcgccaag
gccaacctgctcaccagtggtcccaaggtcgcgcgttacaaggaactgctggcgatcgag
ggcgtgagccgccaggattacgaagatgcgctcgccgccgacgcccaggcccaggccgat
atcgaatcggccaccgccgcgctgcaggaagccaatatcaacctgcgctataccaatgtg
tatgcgccgatcagcggccgtatcagccgttcgaccgtgaccccgggcgcactggtgacg
gccaatcagaccgaagcgctgaccaccgtgcagcagctcgatccgatctatgtggacgtc
acccagtccagcgaagacctgctgcgcttgaagcgcgagatggctgacggcagcctcaaa
caatcgggccaggccaaggtgtcgctggtacttgccgacggcaccaagtacgccgaagcg
ggcaagctgcaattctcggacgtgtccgtggaccagggtaccggcaacgtcacgctgcgc
gccatcttcccgaacccgaaacagaatctcctgccgggcatgttcgtgcgcgccgtgatc
gaatcgggcgtcgacgaaaaagccatcaccgtgccgcagcaaggcgtgacccgcaaccag
aagggccaggccaccgcgctggtcctgaacaaggaaggcaaggtcgaacaacgcgtgctg
accaccgccggcacctacggcaccaagtggctggtgaaatccggcctggccgatggcgac
caggtgatcgtcgaaggcgtacagaaggtcaagccgggcgcgccagccgttgtcgccaag
gccccagccgccgcgccagccgccggtggtgcaccggccgcgccggccgccaagcagtaa
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