Duganella zoogloeoides: SR858_19100
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Entry
SR858_19100 CDS
T09628
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
dzo
Duganella zoogloeoides
Pathway
dzo01501
beta-Lactam resistance
dzo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SR858_19100
01503 Cationic antimicrobial peptide (CAMP) resistance
SR858_19100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_19100
01504 Antimicrobial resistance genes [BR:
dzo01504
]
SR858_19100
Transporters [BR:
dzo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SR858_19100
Antimicrobial resistance genes [BR:
dzo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SR858_19100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WQH03154
LinkDB
All DBs
Position
complement(4313735..4316992)
Genome browser
AA seq
1085 aa
AA seq
DB search
MFLSNFSVKKPVATIVLIVAMMCLGLMALSKLRVNQNPDVEIPFIIVSIPYPGASPETVE
REIINRLEKSFQSITGVTETNSTASEGTARIQVKFGFSKNLIEASDEIRNAIAAVRYKLP
IEMREPILQRIDTSAQPVMQLALSSTAQTHSAISRLAEDKLADRFRGIDGVSSVNIDGSL
KRELSVLLKAEKLREYNVSVGDVVNALRNQNTNAPVGKVRGELDEKSIRLVGRIERPEDF
QQVVIKRNGDDLVRLSQVATIEDGFAEMSSLSVRSGKPNVGISISRSRDASTVSVAHAVR
KLTAEINKELPKGTALEITQDGGEDAESSLNNVIEALVFGAGLTIFVVYAFLNSWRSTLI
TALSLPTSVLAAFIGVWLCGFTLNFMTLLGLSLAIGVLIDDAIVVRENIVRHMQMGADRR
TAALKGTAEIGMAVAATTFSIMAVFIPVAFMPGITGEWFRPFALTVTCSVAVSLLISFTL
DPMLSAFWGDPPDHHTKPRTGISRVLERFNIWFDHQADRYGRVIAWALRHRRTMGIIAVL
TFVAAIGLQMWKGGSSFLPASDFGTIAVDVRTPSSSSLEYSRLKLQNAADIAFTIKEVKQ
TNAYVNVAGGKIYVDLGKKNERNRSSAEVAKELREKLAGLVGAEYTVQDDLANGGGKPVQ
IQFTGADSRKLMEITTDYMERLRKVPGAVDVTLSEQDPKDELQIVLNRGLANSMGIAAGD
AAQALRVAFAGIEVGDWVDPTGESRDVAVRLAPEDRASAENIERLPIAVVGTNQMVPLDQ
IAAVTMGKGPSTIKHKDGKRVITVTANAQGRSDGEVTNAAKALAESIDFPPGYGLSLGGA
GKDMQEVFGAMGIALLAGVGLMYLILVMQFGSFMAPIGVMLSLPLSLIGVVVGLLVTGST
LNLMSLIGVIMLMGLVAKNAILLLEAARTREEEGHSREDALMYAGRMRLRPILMTTFALI
AGMLPVALALGEGGEFYRPMAVAIIGGTITSTLLTLLMVPTFYDSIEIMRENLAIKFQRR
MAYWGARAGGLGLPLAVLITFIEIVLFLVLVRFVYRMVMMAARMVINGTRKAPPDDHGDF
TKKVA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgttcttatcgaatttcagtgtcaagaagccggtcgccacgatcgtgctgatcgtggcc
atgatgtgcctgggcctgatggccctgagcaaattgcgggtcaaccagaacccggacgtc
gaaatcccgttcatcatcgtcagcattccgtacccgggcgcttcgcccgagacggtcgag
cgcgagatcatcaaccgcctggaaaaatcgttccagtcgattaccggcgtgaccgagacc
aactccaccgcgtcggagggcacggcgcgcatccaggtcaagttcgggttcagcaagaac
ctgatcgaagcgtccgacgagatccgcaatgccatcgcggcggtgcgctacaagctgccg
atcgagatgcgcgagccgatcctgcaacggatcgatacctcggcccagccggtcatgcag
ctggcgctgtcgtcaaccgcgcaaacccattcggccatttcgcgtttggccgaagacaag
ctggccgaccgcttccgcggcatcgacggcgtgtcctcggtcaatatcgacggttcgctc
aagcgcgagctctccgtgctgctcaaggcggaaaaactgcgtgaatacaatgtgtcggtg
ggcgacgtggtcaacgcgctgcgcaaccagaacaccaatgcgccggtgggcaaggtgcgc
ggcgagctggacgaaaaaagcatccgtctggtgggccgcatcgagcgtcccgaagacttc
cagcaagtggtgatcaagcgtaatggcgacgacctggtgcgcctgtcgcaggtggccacc
atcgaagacggctttgccgaaatgagctcgctcagcgtccgttcgggcaagcccaatgtc
ggtatctcgatttcgcgttcgcgcgacgcgtccaccgtctcggtggcgcacgcggtgcgc
aagctcactgccgagatcaacaaggaactgccgaagggcaccgcgctggaaatcacccag
gacggcggcgaagacgccgagtccagcctgaataacgtgatcgaggcgctggtgttcggc
gccggcctgaccattttcgtcgtgtacgcgttcctcaactcgtggcgctcgaccctgatc
acggcgctgtcgctgcccacctcggtgctggccgcgttcatcggcgtgtggctgtgcggc
ttcacgctcaacttcatgaccttgctcggcctgtcgctggcaatcggcgtgctgatcgac
gatgccatcgtggtgcgggaaaacatcgtgcgccacatgcagatgggcgccgaccgccgt
accgccgcgctcaaaggcacggcggaaatcggcatggcggtggccgccaccacgttctcg
atcatggccgtgttcatcccggttgcgttcatgcccggcattaccggcgagtggttccgg
ccgttcgcactgaccgtgacctgctcggtggccgtgtccctgctgatctcgtttacgctc
gacccgatgctgtcggcgttctggggcgacccgcccgaccaccacaccaagccgcgcacc
ggcatcagccgggtgctggaacgcttcaatatctggttcgaccaccaggccgaccgctac
ggccgcgtgatcgcctgggcattgcgccaccgccgcaccatgggcatcatcgcggtgctc
acgttcgtggccgcgatcggtttgcagatgtggaagggcggcagcagcttcctgccggcg
tccgactttggcaccattgccgtcgatgtgcgcacgccgtcgtcgtccagcctcgagtac
tcgcgcctgaaactgcagaacgccgccgacattgccttcaccatcaaggaagtcaagcag
accaatgcttatgtgaatgtggccggcggcaagatctacgtggacctgggcaagaaaaat
gagcgcaaccgttcctcggccgaagtggccaaggagctgcgtgaaaaactggccggcctg
gtcggcgccgaatacacggtgcaggacgacctggccaacggcggcggcaaaccggtgcag
atccagttcaccggcgccgattcgcgcaagctgatggaaattaccactgactacatggaa
cgcctgcgcaaggtgcccggtgcggtcgatgtcacgctgtccgagcaggatccgaaggac
gagctgcaaatcgtgctcaaccgtggtctggccaactcgatgggcatcgctgccggcgac
gcggcgcaagcgctgcgggtggcgtttgccggcatcgaagtgggcgactgggtcgatccg
accggtgaatcgcgcgacgtggcggtgcgcctggcgcccgaagaccgtgccagcgcggaa
aacatcgagcgcctgccgatcgccgtggtgggcaccaaccagatggtgccgctcgaccag
atcgctgccgtcaccatgggtaaaggaccatcgaccatcaagcacaaggatggcaagcgc
gtgatcaccgtcaccgccaacgcccagggccgctcggacggcgaagtgaccaacgctgcc
aaggcgctggccgagtcgatcgacttcccgcccggctacggcctgtcgctgggcggcgcc
ggcaaggacatgcaggaagtgttcggcgcgatgggcattgcgctgctggccggcgtgggc
ctgatgtatctgatcctggtgatgcagttcggttccttcatggcgccgatcggcgtgatg
ctgtcgctgccgctgtcgctgatcggcgtggtggtgggcctgctggtgaccggcagcacc
ctcaacctgatgagcctgatcggggtgatcatgctgatggggctggttgccaagaacgcc
atcctgctgctggaggcggcccgcacccgcgaggaagagggccacagccgcgaagacgcg
ctgatgtatgcaggccgcatgcgcctgcggccgatcctgatgaccacgttcgcgctgatc
gccggcatgttgccggtggcgctggcgctcggtgaaggcggtgaattctaccgtccgatg
gcggtggccatcatcggcggcaccatcacgtccacgctgctgaccttgctgatggtgccg
acgttctacgacagcatcgagatcatgcgtgaaaacctggccatcaagttccagcgccgc
atggcgtactggggcgcacgcgccggcggactcggcctgccgctggcggtgctgatcacg
tttatcgagatcgtgttgttcctggtgctggtgcgcttcgtctatcgcatggtgatgatg
gcggcgcggatggtaatcaacggtacccgcaaggcgccaccggacgaccacggcgatttc
accaagaaggtggcatag
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